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The map label for this gene is ydjN [H]

Identifier: 218709694

GI number: 218709694

Start: 1830938

End: 1832311

Strand: Direct

Name: ydjN [H]

Synonym: VS_1705

Alternate gene names: 218709694

Gene position: 1830938-1832311 (Clockwise)

Preceding gene: 218709693

Following gene: 218709695

Centisome position: 55.49

GC content: 47.02

Gene sequence:

>1374_bases
ATGTCATTTTCAGCTATCGCTGCCTTAGCGGTATTCACTGGTATCCTCTTTTTTCTCTACGGACAGCAGAAAAAAGAAAA
CACACTTTCTCGCCTCGTTTTACTCGGTTTAGTTTTCGGTAGTGCTTTTGGCCTTGGTCTTCAACTGCTATTTGGTGAAG
GCAATCCTGTTATCAAAGAGACGCTCGACTGGGTAAACATTGTCGGTCGTGGTTACGTTGGCCTACTAAAAATGGTCATC
ATGCCATTGGTGTTAGTTTCAATGATAGCGGCAGTAGTGAAGCTTGAGAAAGGCGGCTCACTAGGTAAGATTTCCGGCAT
CACCATTTCTGTGTTGCTAGCAACAACGGCAATTTCTGCGATTGTTGGTATTGTTGTGACACAAGCATTCGGCTTGTCGG
CTGAAGGTTTAACTGAAGGCGCTCGCGAAACAGCGCGTATCGCAACACTAGAAAGCCGCATCGGCAGCGTTTCAGACCTA
ACGATTCCACAAATGCTGGTTAGCTTTATTCCGACTAACCCATTTGCAGACCTAACAGGGGCTCGCTCTACTTCTATCAT
CGCGGTAGTTATCTTTGGCGTGCTAACGGGTATTGCTGCTCGTAAGGTGATGGCAGAGAAAGAAGAATTAGAATCTCCAA
TCCGTACGTTCGTTGAAGCGGCTCAATCTATCGTTATGCGCTTAGTTAAGATGATCATGGCACTAACGCCATACGGCATC
GCAGCATTAATGGCGAAGGTAGTCGCAACGTCAAGTGCTTCTGACATCCTAAGCCTATTGGGCTTCATCGTTGCTTCTTA
CGTCGCTATTATCCTGATGTTCGTCGTTCACGGTGTGTTGGTTTCTTTTGTTGGTGTCAACCCGAAAGAGTACTTCCAAA
AGATCTGGCCAGTACTGACGTTCGCTTTCACGTCTCGTAGCTCTGCAGCAACTATTCCCCTGAACGTTGAAGCTCAAATC
ACTAAGTTAAACGTACCACCAGCGATTGCTAACCTGTCTGCGTCTTTCGGTGCAACAATTGGTCAAAATGGTTGTGCGGG
TATTTACCCTGCAATGCTTGCAGTTATGGTTGCGCCTACGGTTGGTATCGACCCAATGGACATCAACTTCATTCTGTCTC
TCATTGCTATTATTACGGTGAGCTCATTCGGTATCGCGGGTGTGGGTGGCGGTGCAACTTTCGCGGCACTTATCGTACTA
CCCGCGATGGGTCTTCCTGTGACTATCGCAGCACTGCTTATCTCTATCGAACCACTTATCGATATGGCACGTACTGCGCT
TAACGTATCTGGTGCAATGACAGCTGGTACAATCACAAGCCGCCTATTGGCTAAAAAGGACAAACAGCAAGATTTGGAAC
AAGCGAACGCTTAA

Upstream 100 bases:

>100_bases
TTATTTTACGTTTTGTTACAGGTCGCTATTTTAGCTAACAGTATTTGCGCCCATATATCTAAGCGCCCTATCGATTCATG
GTTATTCATAAGGAAAAACA

Downstream 100 bases:

>100_bases
TGGGTTCGATTGATCCAATAACTTGAGTCTCGTTACACAAAAACCGACGCACATGCGTCGGTTTTTTATTGCTTACTTGT
TTTGTTTAATCGCATAGAAC

Product: sodium/dicarboxylate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSFSAIAALAVFTGILFFLYGQQKKENTLSRLVLLGLVFGSAFGLGLQLLFGEGNPVIKETLDWVNIVGRGYVGLLKMVI
MPLVLVSMIAAVVKLEKGGSLGKISGITISVLLATTAISAIVGIVVTQAFGLSAEGLTEGARETARIATLESRIGSVSDL
TIPQMLVSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVMAEKEELESPIRTFVEAAQSIVMRLVKMIMALTPYGI
AALMAKVVATSSASDILSLLGFIVASYVAIILMFVVHGVLVSFVGVNPKEYFQKIWPVLTFAFTSRSSAATIPLNVEAQI
TKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGIDPMDINFILSLIAIITVSSFGIAGVGGGATFAALIVL
PAMGLPVTIAALLISIEPLIDMARTALNVSGAMTAGTITSRLLAKKDKQQDLEQANA

Sequences:

>Translated_457_residues
MSFSAIAALAVFTGILFFLYGQQKKENTLSRLVLLGLVFGSAFGLGLQLLFGEGNPVIKETLDWVNIVGRGYVGLLKMVI
MPLVLVSMIAAVVKLEKGGSLGKISGITISVLLATTAISAIVGIVVTQAFGLSAEGLTEGARETARIATLESRIGSVSDL
TIPQMLVSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVMAEKEELESPIRTFVEAAQSIVMRLVKMIMALTPYGI
AALMAKVVATSSASDILSLLGFIVASYVAIILMFVVHGVLVSFVGVNPKEYFQKIWPVLTFAFTSRSSAATIPLNVEAQI
TKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGIDPMDINFILSLIAIITVSSFGIAGVGGGATFAALIVL
PAMGLPVTIAALLISIEPLIDMARTALNVSGAMTAGTITSRLLAKKDKQQDLEQANA
>Mature_456_residues
SFSAIAALAVFTGILFFLYGQQKKENTLSRLVLLGLVFGSAFGLGLQLLFGEGNPVIKETLDWVNIVGRGYVGLLKMVIM
PLVLVSMIAAVVKLEKGGSLGKISGITISVLLATTAISAIVGIVVTQAFGLSAEGLTEGARETARIATLESRIGSVSDLT
IPQMLVSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVMAEKEELESPIRTFVEAAQSIVMRLVKMIMALTPYGIA
ALMAKVVATSSASDILSLLGFIVASYVAIILMFVVHGVLVSFVGVNPKEYFQKIWPVLTFAFTSRSSAATIPLNVEAQIT
KLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGIDPMDINFILSLIAIITVSSFGIAGVGGGATFAALIVLP
AMGLPVTIAALLISIEPLIDMARTALNVSGAMTAGTITSRLLAKKDKQQDLEQANA

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI5032093, Length=402, Percent_Identity=27.8606965174129, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI223468564, Length=278, Percent_Identity=29.8561151079137, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI223468566, Length=277, Percent_Identity=29.6028880866426, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI21314632, Length=417, Percent_Identity=25.4196642685851, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI40254478, Length=455, Percent_Identity=24.1758241758242, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI66773030, Length=417, Percent_Identity=25.8992805755396, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI169790839, Length=281, Percent_Identity=27.4021352313167, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI194239697, Length=274, Percent_Identity=25.5474452554745, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI4827012, Length=296, Percent_Identity=24.6621621621622, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788024, Length=462, Percent_Identity=58.008658008658, Blast_Score=491, Evalue=1e-140,
Organism=Escherichia coli, GI1790514, Length=418, Percent_Identity=25.5980861244019, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789947, Length=406, Percent_Identity=25.1231527093596, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193206505, Length=469, Percent_Identity=25.3731343283582, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71996953, Length=475, Percent_Identity=24.8421052631579, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71983106, Length=473, Percent_Identity=24.3128964059197, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71983099, Length=473, Percent_Identity=24.3128964059197, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17537407, Length=401, Percent_Identity=23.1920199501247, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193206654, Length=438, Percent_Identity=24.6575342465753, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17541374, Length=418, Percent_Identity=22.9665071770335, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24583025, Length=455, Percent_Identity=24.8351648351648, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI17137668, Length=455, Percent_Identity=24.8351648351648, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24583023, Length=455, Percent_Identity=24.8351648351648, Blast_Score=92, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 47593; Mature: 47462

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSAIAALAVFTGILFFLYGQQKKENTLSRLVLLGLVFGSAFGLGLQLLFGEGNPVIKE
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
TLDWVNIVGRGYVGLLKMVIMPLVLVSMIAAVVKLEKGGSLGKISGITISVLLATTAISA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHH
IVGIVVTQAFGLSAEGLTEGARETARIATLESRIGSVSDLTIPQMLVSFIPTNPFADLTG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
ARSTSIIAVVIFGVLTGIAARKVMAEKEELESPIRTFVEAAQSIVMRLVKMIMALTPYGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AALMAKVVATSSASDILSLLGFIVASYVAIILMFVVHGVLVSFVGVNPKEYFQKIWPVLT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FAFTSRSSAATIPLNVEAQITKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPT
HHHHCCCCCEEEEEECEEEEEEECCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCC
VGIDPMDINFILSLIAIITVSSFGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DMARTALNVSGAMTAGTITSRLLAKKDKQQDLEQANA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFSAIAALAVFTGILFFLYGQQKKENTLSRLVLLGLVFGSAFGLGLQLLFGEGNPVIKE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH
TLDWVNIVGRGYVGLLKMVIMPLVLVSMIAAVVKLEKGGSLGKISGITISVLLATTAISA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHH
IVGIVVTQAFGLSAEGLTEGARETARIATLESRIGSVSDLTIPQMLVSFIPTNPFADLTG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
ARSTSIIAVVIFGVLTGIAARKVMAEKEELESPIRTFVEAAQSIVMRLVKMIMALTPYGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AALMAKVVATSSASDILSLLGFIVASYVAIILMFVVHGVLVSFVGVNPKEYFQKIWPVLT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FAFTSRSSAATIPLNVEAQITKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPT
HHHHCCCCCEEEEEECEEEEEEECCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCC
VGIDPMDINFILSLIAIITVSSFGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DMARTALNVSGAMTAGTITSRLLAKKDKQQDLEQANA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]