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The map label for this gene is yraR [H]

Identifier: 218709693

GI number: 218709693

Start: 1830057

End: 1830752

Strand: Direct

Name: yraR [H]

Synonym: VS_1704

Alternate gene names: 218709693

Gene position: 1830057-1830752 (Clockwise)

Preceding gene: 218709682

Following gene: 218709694

Centisome position: 55.47

GC content: 43.82

Gene sequence:

>696_bases
ATGAGTATTAATGGAGATAAAACATCGGTTGTTATAGCTGGTGCGACAGGGCTAATTGGCCATCATGTCCTGAGACTGCT
CATTAACGAGCCCGCTGTAGAACACATCTATGCTTTGTCACGAAGAGCATTAGGTGAAGAATTTCACTCCAACAAACTCG
ATACACTCATCCACAACGATCTACAAGTAACGAGTTGGGACGACACCAAAGCGACGCCCAACTTAGGCATTATCTGCTTA
GGCACAACCAAGAAAAAAGCAGGTTCAAAAGAAGCGCTGCGAAAGATCGATGTAGAACTGGTTAGCCAAGTGGCACAGTC
GATGAAATTCCTTGGAGTTCAACGTGTCGCAGTCGTTTCTAGCTATGGCGCTTCGCCAGACTCCTATTCACACTATCTGC
GCTGTAAGGGAAAAATGGAGCAAAACCTAAAACGTATTGGCTTCAAGCAGCTCTTCATCGCTCGTCCAGGCCCGCTGGTG
GGTGAACGTGCCGAACCCAGAACTGATGAAAAGCTCCTACAAAGAGTCTTCCCTTTAATATCTCCGTTAATGTTTGGAAA
ATTCAAAAACCTACGCCCTATCCAATCGGAAGATGTAGCGAAAGCAATATTATTCCGATTGTTCGAAAATAATTTCCAAA
GTATCGAAATCTACACCTCGACTGACATGCTTAATTTATTAGCGAAATATCATTAA

Upstream 100 bases:

>100_bases
AACCCCATCTTCCTAACGCTCATTCATGAAACTTTTGTTCGCTTAAAATTCAAACACTGTTTATATTAAACAAGCACTTG
TAGAGCGAGTAAGGAATAGA

Downstream 100 bases:

>100_bases
AACGTCTATCTATTCACCACAATGTTGAATATCCATCCAACCCATTGGGTGGATATTACTAATCGTTCTAATAAATTACT
TTTCCTTATTTTACGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSINGDKTSVVIAGATGLIGHHVLRLLINEPAVEHIYALSRRALGEEFHSNKLDTLIHNDLQVTSWDDTKATPNLGIICL
GTTKKKAGSKEALRKIDVELVSQVAQSMKFLGVQRVAVVSSYGASPDSYSHYLRCKGKMEQNLKRIGFKQLFIARPGPLV
GERAEPRTDEKLLQRVFPLISPLMFGKFKNLRPIQSEDVAKAILFRLFENNFQSIEIYTSTDMLNLLAKYH

Sequences:

>Translated_231_residues
MSINGDKTSVVIAGATGLIGHHVLRLLINEPAVEHIYALSRRALGEEFHSNKLDTLIHNDLQVTSWDDTKATPNLGIICL
GTTKKKAGSKEALRKIDVELVSQVAQSMKFLGVQRVAVVSSYGASPDSYSHYLRCKGKMEQNLKRIGFKQLFIARPGPLV
GERAEPRTDEKLLQRVFPLISPLMFGKFKNLRPIQSEDVAKAILFRLFENNFQSIEIYTSTDMLNLLAKYH
>Mature_230_residues
SINGDKTSVVIAGATGLIGHHVLRLLINEPAVEHIYALSRRALGEEFHSNKLDTLIHNDLQVTSWDDTKATPNLGIICLG
TTKKKAGSKEALRKIDVELVSQVAQSMKFLGVQRVAVVSSYGASPDSYSHYLRCKGKMEQNLKRIGFKQLFIARPGPLVG
ERAEPRTDEKLLQRVFPLISPLMFGKFKNLRPIQSEDVAKAILFRLFENNFQSIEIYTSTDMLNLLAKYH

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=171, Percent_Identity=29.2397660818713, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI148728168, Length=171, Percent_Identity=29.2397660818713, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI148728164, Length=171, Percent_Identity=29.2397660818713, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI148728166, Length=171, Percent_Identity=29.2397660818713, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI87082218, Length=218, Percent_Identity=37.6146788990826, Blast_Score=122, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71983631, Length=197, Percent_Identity=27.4111675126904, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320840, Length=225, Percent_Identity=29.7777777777778, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 25864; Mature: 25733

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINGDKTSVVIAGATGLIGHHVLRLLINEPAVEHIYALSRRALGEEFHSNKLDTLIHND
CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LQVTSWDDTKATPNLGIICLGTTKKKAGSKEALRKIDVELVSQVAQSMKFLGVQRVAVVS
CEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYGASPDSYSHYLRCKGKMEQNLKRIGFKQLFIARPGPLVGERAEPRTDEKLLQRVFPLI
HCCCCCCCCHHHHHCCCHHHHHHHHHCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHH
SPLMFGKFKNLRPIQSEDVAKAILFRLFENNFQSIEIYTSTDMLNLLAKYH
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCC
>Mature Secondary Structure 
SINGDKTSVVIAGATGLIGHHVLRLLINEPAVEHIYALSRRALGEEFHSNKLDTLIHND
CCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
LQVTSWDDTKATPNLGIICLGTTKKKAGSKEALRKIDVELVSQVAQSMKFLGVQRVAVVS
CEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYGASPDSYSHYLRCKGKMEQNLKRIGFKQLFIARPGPLVGERAEPRTDEKLLQRVFPLI
HCCCCCCCCHHHHHCCCHHHHHHHHHCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHH
SPLMFGKFKNLRPIQSEDVAKAILFRLFENNFQSIEIYTSTDMLNLLAKYH
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]