Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709675

Identifier: 218709675

GI number: 218709675

Start: 1811947

End: 1812522

Strand: Direct

Name: 218709675

Synonym: VS_1686

Alternate gene names: NA

Gene position: 1811947-1812522 (Clockwise)

Preceding gene: 218709673

Following gene: 218709682

Centisome position: 54.92

GC content: 44.62

Gene sequence:

>576_bases
ATGAACCTTTCTCAACTAAGCCAAGAAATCTACGATCACCTTTACCGCGACATTGAAGAGTTCCGCAGTACTTTTGATCT
GCCTGTTGCTGATCCTGAAACAATGGACGAAAAAGGCGATACGCTACACACCTCTCTAGCGATCGAAGAACTAACAGAAC
TTGCAGAAGCTGACTCTAAAATCGAACAAGCGGACGCTATTGTAGACAGCGTTTATGTTTTGATGGGACGCTTGGTTCAC
CTTGGTCAAGCTAAGGTTGAAGACAATCTAGCAATCAGCTACCTGATCGACCTACTGTTGAATGTTTCTAAAAACCGCTC
AATTGACTTCTTGCCTTGCTGGGACGAAGTACACTCAAGCAACATGAGCAAAGTATGCCGCAACGAAACTGAATACGCCG
AAACAGAAGCTTTCTATGCTGAGCAGAACATCAAGTTGATGGCGGTTCAAAAAGGCGAATACATCATCGCTAAGTGTGCG
GAAGATTTCGTATCTGAAGGCAAGACAATTCGCCAAGGTAAAGTACTAAAATCAGTACACTACCGCCCTGCGAACCTTGA
GCCACTAACGGCTTAA

Upstream 100 bases:

>100_bases
GATACCTCATTAAACCAATGAATAAAAGTCGACTTTGCGTTAGCACCCTATTCCCAGCTTTGGTAAAATACCCCATTAAC
GAAACAGAATGGATAGGAAA

Downstream 100 bases:

>100_bases
GACTGGTTGTCTAAACCGATCAGCACGCCAAAATAGCAAACGCCACGTTTAAATAACGTGGCGTTTTATTATCTGTAAGT
GATTTCAAACTGTGTAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNLSQLSQEIYDHLYRDIEEFRSTFDLPVADPETMDEKGDTLHTSLAIEELTELAEADSKIEQADAIVDSVYVLMGRLVH
LGQAKVEDNLAISYLIDLLLNVSKNRSIDFLPCWDEVHSSNMSKVCRNETEYAETEAFYAEQNIKLMAVQKGEYIIAKCA
EDFVSEGKTIRQGKVLKSVHYRPANLEPLTA

Sequences:

>Translated_191_residues
MNLSQLSQEIYDHLYRDIEEFRSTFDLPVADPETMDEKGDTLHTSLAIEELTELAEADSKIEQADAIVDSVYVLMGRLVH
LGQAKVEDNLAISYLIDLLLNVSKNRSIDFLPCWDEVHSSNMSKVCRNETEYAETEAFYAEQNIKLMAVQKGEYIIAKCA
EDFVSEGKTIRQGKVLKSVHYRPANLEPLTA
>Mature_191_residues
MNLSQLSQEIYDHLYRDIEEFRSTFDLPVADPETMDEKGDTLHTSLAIEELTELAEADSKIEQADAIVDSVYVLMGRLVH
LGQAKVEDNLAISYLIDLLLNVSKNRSIDFLPCWDEVHSSNMSKVCRNETEYAETEAFYAEQNIKLMAVQKGEYIIAKCA
EDFVSEGKTIRQGKVLKSVHYRPANLEPLTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21650; Mature: 21650

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSQLSQEIYDHLYRDIEEFRSTFDLPVADPETMDEKGDTLHTSLAIEELTELAEADSK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IEQADAIVDSVYVLMGRLVHLGQAKVEDNLAISYLIDLLLNVSKNRSIDFLPCWDEVHSS
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHCC
NMSKVCRNETEYAETEAFYAEQNIKLMAVQKGEYIIAKCAEDFVSEGKTIRQGKVLKSVH
CHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHC
YRPANLEPLTA
CCCCCCCCCCC
>Mature Secondary Structure
MNLSQLSQEIYDHLYRDIEEFRSTFDLPVADPETMDEKGDTLHTSLAIEELTELAEADSK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IEQADAIVDSVYVLMGRLVHLGQAKVEDNLAISYLIDLLLNVSKNRSIDFLPCWDEVHSS
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHCC
NMSKVCRNETEYAETEAFYAEQNIKLMAVQKGEYIIAKCAEDFVSEGKTIRQGKVLKSVH
CHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHC
YRPANLEPLTA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA