| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709648
Identifier: 218709648
GI number: 218709648
Start: 1789615
End: 1789866
Strand: Direct
Name: 218709648
Synonym: VS_1658
Alternate gene names: NA
Gene position: 1789615-1789866 (Clockwise)
Preceding gene: 218709647
Following gene: 218709649
Centisome position: 54.24
GC content: 42.06
Gene sequence:
>252_bases ATGCCCAATATCTCCCCATTAAAAGAGCAGCTCACAAAAGCGCTCATCAGAGTCGCTCTCGCGAGTTGTCATTACCTTAA TGAACAGTATCAGCACTTTAAAAAGGAGGTAGAGCAAAGCTCAGATCACGAACTGTTTGAATTCGTTCAACGCCTTTCTT CCACCCACCTGAAACGACTCTTAGCCACTATTGAATTGATGAACCGAGGTTATCTACTGAGTGAAATTCTAGAAGCAGCA AAGGATAAATAA
Upstream 100 bases:
>100_bases GGAGAGAGCTAACCCTATATGTAGCAAGGCCTGAATGACTTTTCATCATTGACTCCCTCCCCTCGACTTATCACTACATT ACCGATAAGTGATACCAATC
Downstream 100 bases:
>100_bases TGGCCTTTCCCGAGGTCATTTATATTCAAATATACAGCCCATTTCACATAATCATTATCCGCCATTTGAGTGAGACGTTA TTTGTCTCACCCATCCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MPNISPLKEQLTKALIRVALASCHYLNEQYQHFKKEVEQSSDHELFEFVQRLSSTHLKRLLATIELMNRGYLLSEILEAA KDK
Sequences:
>Translated_83_residues MPNISPLKEQLTKALIRVALASCHYLNEQYQHFKKEVEQSSDHELFEFVQRLSSTHLKRLLATIELMNRGYLLSEILEAA KDK >Mature_82_residues PNISPLKEQLTKALIRVALASCHYLNEQYQHFKKEVEQSSDHELFEFVQRLSSTHLKRLLATIELMNRGYLLSEILEAAK DK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9685; Mature: 9554
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNISPLKEQLTKALIRVALASCHYLNEQYQHFKKEVEQSSDHELFEFVQRLSSTHLKRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LATIELMNRGYLLSEILEAAKDK HHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure PNISPLKEQLTKALIRVALASCHYLNEQYQHFKKEVEQSSDHELFEFVQRLSSTHLKRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LATIELMNRGYLLSEILEAAKDK HHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA