| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709647
Identifier: 218709647
GI number: 218709647
Start: 1788998
End: 1789438
Strand: Direct
Name: 218709647
Synonym: VS_1657
Alternate gene names: NA
Gene position: 1788998-1789438 (Clockwise)
Preceding gene: 218709646
Following gene: 218709648
Centisome position: 54.22
GC content: 42.86
Gene sequence:
>441_bases ATGTCTACTCTGCTCTTTCACCCATCAAGTTTACCTGTGTCTGACAAACTTCACGCACTGTTAAACAACCATTTTCAACA ACAATTAACCCAGTGTGAGTCAATAGCCCAAAGTACTTACCTGACGTTCAACTTTCGAGATAGTTCATACAGCTCAGAAG CTGGTGGATTTCACCCTGTTGAAATCGCGATGACACAGATCTCCAGTGGTCTATGGAATGTCGAATACATCACTGATTTT GCTTACGTTGGGAGTGTGTATCCAGAATTGGCACGATGTCTAGACTTTGATTTTCGAGACCAAGCGTTCTTTACAGAGTT CGGGGGATGGAGCCCAATCAAGGGCAACTATTCCGCTGTAGAGATGTTCGAGCTTTGGCAGGATAACTTCTTAAACTACA TCGATATGGAAGCGTTTGACTCTATATCTATCACTTCGTAA
Upstream 100 bases:
>100_bases CATTTAACTCAGCATGTCTTCGATGACATACAAGTCACTCAAGTCCGCTAAGGCTAACCAATCACCACACTCTTTCATCT AAATTCAAGGAGGCATCAAT
Downstream 100 bases:
>100_bases TGAGAGAACAACCCGTCCGGGTCTATGTCACGATACAAAGGCACCGGACCACTACAGCCATCAAAAGTCGTGCTTCGGAG AGAGCTAACCCTATATGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSTLLFHPSSLPVSDKLHALLNNHFQQQLTQCESIAQSTYLTFNFRDSSYSSEAGGFHPVEIAMTQISSGLWNVEYITDF AYVGSVYPELARCLDFDFRDQAFFTEFGGWSPIKGNYSAVEMFELWQDNFLNYIDMEAFDSISITS
Sequences:
>Translated_146_residues MSTLLFHPSSLPVSDKLHALLNNHFQQQLTQCESIAQSTYLTFNFRDSSYSSEAGGFHPVEIAMTQISSGLWNVEYITDF AYVGSVYPELARCLDFDFRDQAFFTEFGGWSPIKGNYSAVEMFELWQDNFLNYIDMEAFDSISITS >Mature_145_residues STLLFHPSSLPVSDKLHALLNNHFQQQLTQCESIAQSTYLTFNFRDSSYSSEAGGFHPVEIAMTQISSGLWNVEYITDFA YVGSVYPELARCLDFDFRDQAFFTEFGGWSPIKGNYSAVEMFELWQDNFLNYIDMEAFDSISITS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16678; Mature: 16546
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLFHPSSLPVSDKLHALLNNHFQQQLTQCESIAQSTYLTFNFRDSSYSSEAGGFHPV CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHH EIAMTQISSGLWNVEYITDFAYVGSVYPELARCLDFDFRDQAFFTEFGGWSPIKGNYSAV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHH EMFELWQDNFLNYIDMEAFDSISITS HHHHHHHHHCCCEECHHHCCCEECCC >Mature Secondary Structure STLLFHPSSLPVSDKLHALLNNHFQQQLTQCESIAQSTYLTFNFRDSSYSSEAGGFHPV CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHH EIAMTQISSGLWNVEYITDFAYVGSVYPELARCLDFDFRDQAFFTEFGGWSPIKGNYSAV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHH EMFELWQDNFLNYIDMEAFDSISITS HHHHHHHHHCCCEECHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA