| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709605
Identifier: 218709605
GI number: 218709605
Start: 1731661
End: 1731921
Strand: Reverse
Name: 218709605
Synonym: VS_1615
Alternate gene names: NA
Gene position: 1731921-1731661 (Counterclockwise)
Preceding gene: 218709606
Following gene: 218709602
Centisome position: 52.49
GC content: 44.06
Gene sequence:
>261_bases ATGAACATGAGCGATACTAATTCAAGACCAGCTTTACCAGATCATCTTGCAGGTAACCCACGCAGCCCACACCACGTGGC TGAGTGTTTCGAATACCCAATCGGCATTCGTCTAAATGGTAAAGAGCGTACTGATGTTGAAGAATACTGCATCAGCGAAG GTTGGGTTAAGATCCCTTCTCCAAAAGCGCTAGATCGTTTTGGTCAGCCAATGCTTATTACTCTTAAAGGCACAGTAGAA GCTTTCTACATCGAAGATTAA
Upstream 100 bases:
>100_bases TTGATTAAAACGATCTCTACGATTTATTGCACCAGTTGTTGAGCACTAAGCCTATATTGACTAGAATGACGCACTTTTTT TATTTACGTACATACAGGTA
Downstream 100 bases:
>100_bases TCACTTCGTGTAACTCGATAATGTCGAGTACAAAACGCTGTTATATAGAAGGGTCTAGAGAAATCTAGGTCCTTTTTGTT TGCGTATGATTCCTTGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRFGQPMLITLKGTVE AFYIED
Sequences:
>Translated_86_residues MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRFGQPMLITLKGTVE AFYIED >Mature_86_residues MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRFGQPMLITLKGTVE AFYIED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9702; Mature: 9702
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCEEECCC PKALDRFGQPMLITLKGTVEAFYIED CHHHHHCCCCEEEEEECCEEEEEECC >Mature Secondary Structure MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCEEECCC PKALDRFGQPMLITLKGTVEAFYIED CHHHHHCCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA