Click here to switch to the map view.

The map label for this gene is yeaS [C]

Identifier: 218709575

GI number: 218709575

Start: 1711996

End: 1712610

Strand: Reverse

Name: yeaS [C]

Synonym: VS_1585

Alternate gene names: 218709575

Gene position: 1712610-1711996 (Counterclockwise)

Preceding gene: 218709576

Following gene: 218709574

Centisome position: 51.91

GC content: 42.28

Gene sequence:

>615_bases
ATGTCAATTACATCAGGAATTGCTCTATTTGTTGCGATGTTACTATCTGCAGCCATACCGGGACCCAGCGTTCTCGCAGT
TCTGTCGAGGTCTCTAAGCTTTGGTTGGAAACAAGGCTTGTTAGTGGTGCTTGGCGTACTAATCGCGGATTACATTTTTA
TATTCTTAGCTTTGTCTGGTTTATCAGCTTTAGCTAGCGCAATGGGTGAATTTGCTACGGTAATTAAATATGTAGGCGTT
ACCTATTTGTTTTGGTTGGCTTACACAACATGGACGTCAGATGTTAGTGAATCATCGAGTACATCTTCGGAGCAAGGAAC
GAAAGCCTCAAGCGTGACTATCGGCTTATTGATGACAGTTTCAAACCCAAAGGCGATTTTGTTTTACATGGGTTTCTTTC
CCGCATTCATAGACCTAAAAACATTTACCACAACAGATGTGATGATGATTTTGGTGATTTCAACTGTAGCTGTAGGTGGA
GTATTGAGTCTCTATGCTTGCACTGCCTCTAAAGCTCGTTTTGTATTTCAAGGGCGCTCAGCAAAGATGCTATTGAACAG
GTTATCAGGTGGCTTTTTGGCGACTTGCGGTGCTTTGCTAGCAACTAAAACATGA

Upstream 100 bases:

>100_bases
TTAGGTGGCGCAGCAGGCCCGCAATTTATCATGCGCGGTCAAATCGTTTAGTCACATAAATAGGTTAATTGTCGAACGAC
AAACGATCTAGGGAGGGATC

Downstream 100 bases:

>100_bases
GTACTCTTAGGACTGTTTTAACCATAACACCAAACTAAGTGTTAACACCTAGTGTCTTTGCCTGCTTCATGGCATCATTC
CACGTAGCTAAAACCCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSITSGIALFVAMLLSAAIPGPSVLAVLSRSLSFGWKQGLLVVLGVLIADYIFIFLALSGLSALASAMGEFATVIKYVGV
TYLFWLAYTTWTSDVSESSSTSSEQGTKASSVTIGLLMTVSNPKAILFYMGFFPAFIDLKTFTTTDVMMILVISTVAVGG
VLSLYACTASKARFVFQGRSAKMLLNRLSGGFLATCGALLATKT

Sequences:

>Translated_204_residues
MSITSGIALFVAMLLSAAIPGPSVLAVLSRSLSFGWKQGLLVVLGVLIADYIFIFLALSGLSALASAMGEFATVIKYVGV
TYLFWLAYTTWTSDVSESSSTSSEQGTKASSVTIGLLMTVSNPKAILFYMGFFPAFIDLKTFTTTDVMMILVISTVAVGG
VLSLYACTASKARFVFQGRSAKMLLNRLSGGFLATCGALLATKT
>Mature_203_residues
SITSGIALFVAMLLSAAIPGPSVLAVLSRSLSFGWKQGLLVVLGVLIADYIFIFLALSGLSALASAMGEFATVIKYVGVT
YLFWLAYTTWTSDVSESSSTSSEQGTKASSVTIGLLMTVSNPKAILFYMGFFPAFIDLKTFTTTDVMMILVISTVAVGGV
LSLYACTASKARFVFQGRSAKMLLNRLSGGFLATCGALLATKT

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=126, Percent_Identity=36.5079365079365, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994979, Length=192, Percent_Identity=28.125, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21498; Mature: 21367

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITSGIALFVAMLLSAAIPGPSVLAVLSRSLSFGWKQGLLVVLGVLIADYIFIFLALSG
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSALASAMGEFATVIKYVGVTYLFWLAYTTWTSDVSESSSTSSEQGTKASSVTIGLLMTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEE
SNPKAILFYMGFFPAFIDLKTFTTTDVMMILVISTVAVGGVLSLYACTASKARFVFQGRS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCH
AKMLLNRLSGGFLATCGALLATKT
HHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SITSGIALFVAMLLSAAIPGPSVLAVLSRSLSFGWKQGLLVVLGVLIADYIFIFLALSG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSALASAMGEFATVIKYVGVTYLFWLAYTTWTSDVSESSSTSSEQGTKASSVTIGLLMTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEE
SNPKAILFYMGFFPAFIDLKTFTTTDVMMILVISTVAVGGVLSLYACTASKARFVFQGRS
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCH
AKMLLNRLSGGFLATCGALLATKT
HHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]