| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yecA [C]
Identifier: 218709570
GI number: 218709570
Start: 1708959
End: 1709474
Strand: Direct
Name: yecA [C]
Synonym: VS_1580
Alternate gene names: 218709570
Gene position: 1708959-1709474 (Clockwise)
Preceding gene: 218709564
Following gene: 218709586
Centisome position: 51.8
GC content: 41.09
Gene sequence:
>516_bases TTGAATTTCGAAATTTGTCTAATAGGAGCAAAGCTAGAGAACAAACCGTTACTAGCAAACAAAAACCAAACAGCCTTTGC TCACATCACTGCTTTATCAATTGCAATATATGCGTATAATCCCCGCTCCATTGCGCTATCGCCATTAAAAATAGCGCCAT TCAACACTTTTAATGAGTACCCAATGTCGAAACTATTTTTCAAAGGCCGTATCGAAACAAGACAGAACCACGTTCTTGCT GGCTACAACGTAAACCGCGATGTAAAAGCGGGTACTGAAGAATCTCCAATTGCTGTAGTAGTTCAAACTGAAGCGCGCAA AGCAGAAGTTGAAGCATTAGCTGCTGAAAATACTATCTTCGTTACTGTTACAGTCGACGCAGACAAAGAAGAGAACACCA TCGAGCTTGATACTCTACTGAACAAGCCAAAAACGATGACGTTTGAAAAGACCCCTAACCGTAACGACCCATGTTCTTGC GGTAGCGGTAAGAAATACAAGAAATGTTGTGCATAA
Upstream 100 bases:
>100_bases AATCCCACAGGATGGCATCTAACTTCATGGGGTATCTCGTTGTTTAAATTGACGATTTCAATTTATCACTTGAAACCCTA TTGAGGGAAATCTTATTGTC
Downstream 100 bases:
>100_bases GCACTTCTGATTCATGCTACTCATAGTGTGATTGAGATGATTGATTAAAACGGGCAGATCACTACGATCTGCCCGTTTTT TTATGTCTCGAGTTGCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEYPMSKLFFKGRIETRQNHVLA GYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIFVTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSC GSGKKYKKCCA
Sequences:
>Translated_171_residues MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEYPMSKLFFKGRIETRQNHVLA GYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIFVTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSC GSGKKYKKCCA >Mature_171_residues MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEYPMSKLFFKGRIETRQNHVLA GYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIFVTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSC GSGKKYKKCCA
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18961; Mature: 18961
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEY CCEEEEEEECEECCCCEEECCCCCEEEEEEEEEEEEEEECCCCEEECCEEECCCCCCCCC PMSKLFFKGRIETRQNHVLAGYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIF CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEECCCEEE VTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSCGSGKKYKKCCA EEEEEECCCCCCEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEY CCEEEEEEECEECCCCEEECCCCCEEEEEEEEEEEEEEECCCCEEECCEEECCCCCCCCC PMSKLFFKGRIETRQNHVLAGYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIF CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEECCCEEE VTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSCGSGKKYKKCCA EEEEEECCCCCCEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA