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The map label for this gene is 218709561

Identifier: 218709561

GI number: 218709561

Start: 1704540

End: 1705139

Strand: Reverse

Name: 218709561

Synonym: VS_1571

Alternate gene names: NA

Gene position: 1705139-1704540 (Counterclockwise)

Preceding gene: 218709562

Following gene: 218709557

Centisome position: 51.68

GC content: 40.33

Gene sequence:

>600_bases
TTGGCCCGTTTATCGCGTCAATGGATGAGTTTTCTCGTCACCTTGTCTGCGAAAAATGTGGGCATAAAGAGATACAAGAT
TAGTCGTGTTATTTTACAAAACATTGGATTCAATACAGTTAGATCGTCAATTGGCTTAGGAATAAAACGAATGAAAGTAG
AAACGATTGAAGCCGTAAAGGCGTATGGATTTTCAGTAAGAACCACTAATACCGATGAGATTGATCCAACAAAAGCAAAG
ATAGGTCAATTATGGCAAGGTTTTTTCGATCAAGCTTTTCCTAAGCTGACACCAGATTCGAAAGTGTATGGCGTCTACAC
CAATTACCAATCGGATTTTACTGGTGAGTTCGATGTTGTTGCGTGTACCAATGCACTTACCGATAAAAATCTAAATAATC
TGGTGGAAACCGAAATTGAAGCAGGTAAGTACCTAACGTTTTCTGCTAAAGGTGAACTTCCTCAAGCGGTCATCGATTTA
TGGGGCGAAGTGTGGGCGTACTTCAACGCTGCAGATTGCCCACATGTTCGAACCTACACGACAGACTTTGAATTTTACAA
AGGGGAAACTGAAGTCGAGATTTCGATAGCGATTCAATAA

Upstream 100 bases:

>100_bases
CAACATGTTGTTGTGTTGGTCAGAAAGACGAGTGCGTTTGCAGACAAACCTAACCAAAAGCGAAGCGAGTTTTGGGCAGG
CATGATAAAAGGTTGGTTCC

Downstream 100 bases:

>100_bases
GCTTTGGGTTGTCGTTAGTGATAGTCAAATTGAGTCATTAGTAAAAGAGTCGCTCTGTATTGAGCGGCTCTTTTTATTGG
GGTACACCGCCTAAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Activator; Orphan Protein; CTA2 Subfamily 1 Protein

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MARLSRQWMSFLVTLSAKNVGIKRYKISRVILQNIGFNTVRSSIGLGIKRMKVETIEAVKAYGFSVRTTNTDEIDPTKAK
IGQLWQGFFDQAFPKLTPDSKVYGVYTNYQSDFTGEFDVVACTNALTDKNLNNLVETEIEAGKYLTFSAKGELPQAVIDL
WGEVWAYFNAADCPHVRTYTTDFEFYKGETEVEISIAIQ

Sequences:

>Translated_199_residues
MARLSRQWMSFLVTLSAKNVGIKRYKISRVILQNIGFNTVRSSIGLGIKRMKVETIEAVKAYGFSVRTTNTDEIDPTKAK
IGQLWQGFFDQAFPKLTPDSKVYGVYTNYQSDFTGEFDVVACTNALTDKNLNNLVETEIEAGKYLTFSAKGELPQAVIDL
WGEVWAYFNAADCPHVRTYTTDFEFYKGETEVEISIAIQ
>Mature_198_residues
ARLSRQWMSFLVTLSAKNVGIKRYKISRVILQNIGFNTVRSSIGLGIKRMKVETIEAVKAYGFSVRTTNTDEIDPTKAKI
GQLWQGFFDQAFPKLTPDSKVYGVYTNYQSDFTGEFDVVACTNALTDKNLNNLVETEIEAGKYLTFSAKGELPQAVIDLW
GEVWAYFNAADCPHVRTYTTDFEFYKGETEVEISIAIQ

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22487; Mature: 22356

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSRQWMSFLVTLSAKNVGIKRYKISRVILQNIGFNTVRSSIGLGIKRMKVETIEAVK
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH
AYGFSVRTTNTDEIDPTKAKIGQLWQGFFDQAFPKLTPDSKVYGVYTNYQSDFTGEFDVV
HHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEE
ACTNALTDKNLNNLVETEIEAGKYLTFSAKGELPQAVIDLWGEVWAYFNAADCPHVRTYT
EECCHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE
TDFEFYKGETEVEISIAIQ
CCCEEECCCCEEEEEEEEC
>Mature Secondary Structure 
ARLSRQWMSFLVTLSAKNVGIKRYKISRVILQNIGFNTVRSSIGLGIKRMKVETIEAVK
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH
AYGFSVRTTNTDEIDPTKAKIGQLWQGFFDQAFPKLTPDSKVYGVYTNYQSDFTGEFDVV
HHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEE
ACTNALTDKNLNNLVETEIEAGKYLTFSAKGELPQAVIDLWGEVWAYFNAADCPHVRTYT
EECCHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEE
TDFEFYKGETEVEISIAIQ
CCCEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA