| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709543
Identifier: 218709543
GI number: 218709543
Start: 1687311
End: 1688120
Strand: Reverse
Name: 218709543
Synonym: VS_1552
Alternate gene names: NA
Gene position: 1688120-1687311 (Counterclockwise)
Preceding gene: 218709545
Following gene: 218709542
Centisome position: 51.17
GC content: 38.89
Gene sequence:
>810_bases ATGGAAGAATTGATAGCCCAATATACGGGGGCAAACGAAGATGAAAGGCTAACTCGGCAATATATCGCTCAGTTAGAGTT TGATACTACGATACATAAACTCACACCTTATTTACTTAAAGGGAAATCAGTATGTGAGTTAGGAGCAGCAACGGGGCGCT ATTCCTTACATTTTGCAAAATTAGGTTGTGATGTTACAGCAGTAGAACTTGCGCCTGACCAAGTGAAGATTTTAAATACT AAAGCAAAATCTGAAGGTATTGAGTTAAAAGTGTTTGAGGGTAATGCTTGTGATGTGTCATTTATCGAAAGTAGTTCTCT AGACGTTTGTGTAATTCTTGGGCCCTTGTACCACCTAAAAACTCTGCATGAAAGAGAGCTTGCGGTTAATGAAGCACTAA GGATTTTAAAGCCAAATGGTGTACTAGCCATAGCCTATATTTCACGTTTCTTTGTCGCTGGTATGTTTGCCCAACAATTT CCAGAGCTAGTCACTCCGGAGGTGCTTTTAGAGTTAAATAAACATGGCACTGTATCAAACGCTAAAGCCGATAGTTTTTT CAAGGTCGGGTATTTCGCAACGCCTAGTGAAATTGAAAATCTTGTAAACAAAAATGGGTTTAATGTAATTGGACACGCAG CAACAGATGGATTTGGACGTTACATATCTAACGGTGTTAATAACTTTACGCCATCTCAATATCAGACATGGTTAGATTAT CATTTAGCAAATTGCGACGAAGCAAGCCTTTTGGGATCAAGTAATCATGGTTTAGTGATCGCTAGAAAAGCCAGTTCACA AAGCAGTTAA
Upstream 100 bases:
>100_bases CCTTTAAGTATCGTTCTAATAACAAATTTAAGTCGACTGTGTAGTGGTTGCGTTGTCACCTACTTAACGCAGCGCTAACT GGCAAAGGGGATGTTGACCA
Downstream 100 bases:
>100_bases GTCGGATTCATAAACGTGTGCCGATTCCGTTTCGCTTCATTATGTCACTCGTACACTCACCGTTTATTGGGACGTTAGCT GTTCTATTGGTATCAGAGGG
Product: putative SAM dependant methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methionine Biosynthesis Protein MetW; Acetyl Transferase; SAM Dependant Methyltransferase
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MEELIAQYTGANEDERLTRQYIAQLEFDTTIHKLTPYLLKGKSVCELGAATGRYSLHFAKLGCDVTAVELAPDQVKILNT KAKSEGIELKVFEGNACDVSFIESSSLDVCVILGPLYHLKTLHERELAVNEALRILKPNGVLAIAYISRFFVAGMFAQQF PELVTPEVLLELNKHGTVSNAKADSFFKVGYFATPSEIENLVNKNGFNVIGHAATDGFGRYISNGVNNFTPSQYQTWLDY HLANCDEASLLGSSNHGLVIARKASSQSS
Sequences:
>Translated_269_residues MEELIAQYTGANEDERLTRQYIAQLEFDTTIHKLTPYLLKGKSVCELGAATGRYSLHFAKLGCDVTAVELAPDQVKILNT KAKSEGIELKVFEGNACDVSFIESSSLDVCVILGPLYHLKTLHERELAVNEALRILKPNGVLAIAYISRFFVAGMFAQQF PELVTPEVLLELNKHGTVSNAKADSFFKVGYFATPSEIENLVNKNGFNVIGHAATDGFGRYISNGVNNFTPSQYQTWLDY HLANCDEASLLGSSNHGLVIARKASSQSS >Mature_269_residues MEELIAQYTGANEDERLTRQYIAQLEFDTTIHKLTPYLLKGKSVCELGAATGRYSLHFAKLGCDVTAVELAPDQVKILNT KAKSEGIELKVFEGNACDVSFIESSSLDVCVILGPLYHLKTLHERELAVNEALRILKPNGVLAIAYISRFFVAGMFAQQF PELVTPEVLLELNKHGTVSNAKADSFFKVGYFATPSEIENLVNKNGFNVIGHAATDGFGRYISNGVNNFTPSQYQTWLDY HLANCDEASLLGSSNHGLVIARKASSQSS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29528; Mature: 29528
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELIAQYTGANEDERLTRQYIAQLEFDTTIHKLTPYLLKGKSVCELGAATGRYSLHFAK CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEE LGCDVTAVELAPDQVKILNTKAKSEGIELKVFEGNACDVSFIESSSLDVCVILGPLYHLK CCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEHHHHHHH TLHERELAVNEALRILKPNGVLAIAYISRFFVAGMFAQQFPELVTPEVLLELNKHGTVSN HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCHHHCCHHHHHEECCCCCCCC AKADSFFKVGYFATPSEIENLVNKNGFNVIGHAATDGFGRYISNGVNNFTPSQYQTWLDY CCCCCEEEECEEECHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHH HLANCDEASLLGSSNHGLVIARKASSQSS HHCCCCCHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MEELIAQYTGANEDERLTRQYIAQLEFDTTIHKLTPYLLKGKSVCELGAATGRYSLHFAK CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEE LGCDVTAVELAPDQVKILNTKAKSEGIELKVFEGNACDVSFIESSSLDVCVILGPLYHLK CCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEHHHHHHH TLHERELAVNEALRILKPNGVLAIAYISRFFVAGMFAQQFPELVTPEVLLELNKHGTVSN HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCHHHCCHHHHHEECCCCCCCC AKADSFFKVGYFATPSEIENLVNKNGFNVIGHAATDGFGRYISNGVNNFTPSQYQTWLDY CCCCCEEEECEEECHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHH HLANCDEASLLGSSNHGLVIARKASSQSS HHCCCCCHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA