Click here to switch to the map view.

The map label for this gene is 218709542

Identifier: 218709542

GI number: 218709542

Start: 1686869

End: 1687207

Strand: Reverse

Name: 218709542

Synonym: VS_1551

Alternate gene names: NA

Gene position: 1687207-1686869 (Counterclockwise)

Preceding gene: 218709543

Following gene: 218709541

Centisome position: 51.14

GC content: 37.17

Gene sequence:

>339_bases
ATGTTTAAATTCGTAAGGTTGATAGTGCTATCAAATTTATTAGCACTGCTAATTGTAGTTACTTTCGAGTATTTCACAGG
CTATTTGAAACTAGCATTTTCTAGTGATTATGCGTTCTATTCAATGCTAATTCTTCTTGCTCTGGGTTCACTTTTGTCTT
TTTCCGGTCATAAGGTCGGATATAGTGACCCTAGTAACATGGCTGGCGTTTCTGCTAGTTCGTTAATTGAAAACGAGTCT
GCTAAATCAACCATTGTGACAAAATTAGAGAGTACGTCTGTCGGGCACAGCTTATTGATTGCTAGTTTATTGCCACTACT
TTATTGCCTACTATCGTAG

Upstream 100 bases:

>100_bases
GGATTCATAAACGTGTGCCGATTCCGTTTCGCTTCATTATGTCACTCGTACACTCACCGTTTATTGGGACGTTAGCTGTT
CTATTGGTATCAGAGGGAAT

Downstream 100 bases:

>100_bases
CCATCACCGAATAAATTATTTAACTGGATTCCAAAACGCTCGGCACTTTTGTAATGGTCGGCTTTTGTGGGTAAGGTAGT
CATATTAGTTTGGTTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MFKFVRLIVLSNLLALLIVVTFEYFTGYLKLAFSSDYAFYSMLILLALGSLLSFSGHKVGYSDPSNMAGVSASSLIENES
AKSTIVTKLESTSVGHSLLIASLLPLLYCLLS

Sequences:

>Translated_112_residues
MFKFVRLIVLSNLLALLIVVTFEYFTGYLKLAFSSDYAFYSMLILLALGSLLSFSGHKVGYSDPSNMAGVSASSLIENES
AKSTIVTKLESTSVGHSLLIASLLPLLYCLLS
>Mature_112_residues
MFKFVRLIVLSNLLALLIVVTFEYFTGYLKLAFSSDYAFYSMLILLALGSLLSFSGHKVGYSDPSNMAGVSASSLIENES
AKSTIVTKLESTSVGHSLLIASLLPLLYCLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12137; Mature: 12137

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKFVRLIVLSNLLALLIVVTFEYFTGYLKLAFSSDYAFYSMLILLALGSLLSFSGHKVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
YSDPSNMAGVSASSLIENESAKSTIVTKLESTSVGHSLLIASLLPLLYCLLS
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFKFVRLIVLSNLLALLIVVTFEYFTGYLKLAFSSDYAFYSMLILLALGSLLSFSGHKVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
YSDPSNMAGVSASSLIENESAKSTIVTKLESTSVGHSLLIASLLPLLYCLLS
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA