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The map label for this gene is 218709478

Identifier: 218709478

GI number: 218709478

Start: 1619910

End: 1620584

Strand: Reverse

Name: 218709478

Synonym: VS_1487

Alternate gene names: NA

Gene position: 1620584-1619910 (Counterclockwise)

Preceding gene: 218709479

Following gene: 218709477

Centisome position: 49.12

GC content: 42.37

Gene sequence:

>675_bases
TTGGCCTTGGATACTAATTTGGATCAGGCACAAGAGCCTGAGCTCGCAAAAGAATTAAAGCAAGAACAGACACTAAGAAC
TGAAATCTATCTGGTTCTTTCTGCATTGTTTCGTAGCGCACCTTCTGAAGAGGTGATCGACTTTCTAAAGACACTAGACA
TTGAAGCGTCTGAAAGTGCGATGCAAAAGGCTTGGATTGCGATTCAACAAGCAGCAACTGAATCAAACCGCGAAGCACTA
GAAGATGAATATCAGAATCTTTTCATTGGCATTGGTCGTGGGGAGATTGTTCCATTTGGATCTTGGCACAGAACAGGATC
GATGATGGAAAAACCATTAGCTGAGATCCGTCACGATCTTGAATTGCTTGGCATTGAACGTGATGAGCAGGTTAAAGAAC
CAGAAGATCATATTGCGGCTCTTTGTGAAGTAATGGCGATGCTAACCGATGAAGAAGACGCGCTTCAACAAGCCGTTTTC
AATAAACATATCGGGCCTTGGTTTAACTCTTTTACGCGTCAGCTTGAAAGTGCAGAAAGTGCGAACTTCTACAAATCAGC
AGCACAGCTATGTGAAGCATTCTTAACGTTGGAGCAGGTTCGTTTCAGCGTGAATACAAAAAGCAGTAAACACAAATTAA
AGATTGATGTGAAAAACGTCGCTGATTACGAGTAA

Upstream 100 bases:

>100_bases
GACAGCAATTAATCGTATTGCGATGTGTGAAGACTGCCGTGTGGTAGACATGTTCGATTCAATGGCTCAAGACCCATTGA
AACAATTGAAATACTAGGAG

Downstream 100 bases:

>100_bases
TCGAGCAGTACGCGATTATATCGATAGAGGGGCATGAAGCCTCCAAAAAGATCTACCGCAAGGTAAGGAAGCAATGATGA
AAGATAACAAAGAAATAGAT

Product: putative formate dehydrogenase-specific chaperone

Products: NA

Alternate protein names: Cytoplasmic Chaperone rD; Chaperone rD Family; Chaperone; RD Family Cytoplasmic Chaperone; RA Specific Chaperone; Cytoplasmic Chaperone rD Subfamily; Formate Dehydrogenase-Specific Chaperone; Chaperone Protein rD; Chaperone rD; Chaperone Protein rD Family; Multi-Domain Fusion Protein; Cytoplasmic Chaperone rd Family Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MALDTNLDQAQEPELAKELKQEQTLRTEIYLVLSALFRSAPSEEVIDFLKTLDIEASESAMQKAWIAIQQAATESNREAL
EDEYQNLFIGIGRGEIVPFGSWHRTGSMMEKPLAEIRHDLELLGIERDEQVKEPEDHIAALCEVMAMLTDEEDALQQAVF
NKHIGPWFNSFTRQLESAESANFYKSAAQLCEAFLTLEQVRFSVNTKSSKHKLKIDVKNVADYE

Sequences:

>Translated_224_residues
MALDTNLDQAQEPELAKELKQEQTLRTEIYLVLSALFRSAPSEEVIDFLKTLDIEASESAMQKAWIAIQQAATESNREAL
EDEYQNLFIGIGRGEIVPFGSWHRTGSMMEKPLAEIRHDLELLGIERDEQVKEPEDHIAALCEVMAMLTDEEDALQQAVF
NKHIGPWFNSFTRQLESAESANFYKSAAQLCEAFLTLEQVRFSVNTKSSKHKLKIDVKNVADYE
>Mature_223_residues
ALDTNLDQAQEPELAKELKQEQTLRTEIYLVLSALFRSAPSEEVIDFLKTLDIEASESAMQKAWIAIQQAATESNREALE
DEYQNLFIGIGRGEIVPFGSWHRTGSMMEKPLAEIRHDLELLGIERDEQVKEPEDHIAALCEVMAMLTDEEDALQQAVFN
KHIGPWFNSFTRQLESAESANFYKSAAQLCEAFLTLEQVRFSVNTKSSKHKLKIDVKNVADYE

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25468; Mature: 25337

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDTNLDQAQEPELAKELKQEQTLRTEIYLVLSALFRSAPSEEVIDFLKTLDIEASESA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
MQKAWIAIQQAATESNREALEDEYQNLFIGIGRGEIVPFGSWHRTGSMMEKPLAEIRHDL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHH
ELLGIERDEQVKEPEDHIAALCEVMAMLTDEEDALQQAVFNKHIGPWFNSFTRQLESAES
HHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ANFYKSAAQLCEAFLTLEQVRFSVNTKSSKHKLKIDVKNVADYE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
ALDTNLDQAQEPELAKELKQEQTLRTEIYLVLSALFRSAPSEEVIDFLKTLDIEASESA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH
MQKAWIAIQQAATESNREALEDEYQNLFIGIGRGEIVPFGSWHRTGSMMEKPLAEIRHDL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHH
ELLGIERDEQVKEPEDHIAALCEVMAMLTDEEDALQQAVFNKHIGPWFNSFTRQLESAES
HHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ANFYKSAAQLCEAFLTLEQVRFSVNTKSSKHKLKIDVKNVADYE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA