| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709444
Identifier: 218709444
GI number: 218709444
Start: 1586480
End: 1586755
Strand: Direct
Name: 218709444
Synonym: VS_1453
Alternate gene names: NA
Gene position: 1586480-1586755 (Clockwise)
Preceding gene: 218709443
Following gene: 218709445
Centisome position: 48.09
GC content: 40.58
Gene sequence:
>276_bases ATGTTGAAAGTAGAAATCTTCCCAGAACACGAGCAACCAATCACAAGAACATTACCAGGCAAAGATGGTAAACAAGCCAG AACGATAAGAGAACAAATAGGATATGCATATCTAGGTGGTAAGTTCCCAGTCGAAATGAAGCTCTCATTACAAGACGACC AATCTGCATATAAATCAGGAAACTACGAACTTGATAGCTCAAGCTTTACCGTGAATAACTTCGGTGGACTGGAATTAAAA CGCTTCGGCATTAAGCTCGCGAGGTCGATGAAATAA
Upstream 100 bases:
>100_bases AGAAGTTCAATCACTACAGATACCATCTTGGTATCAACTACCGAAAGTAGCGCAATCAAATGTGCTGCCGTTTAAAGCTT ACGTAGCTTAAGGAAAAGAT
Downstream 100 bases:
>100_bases TGGAAGATCAAGTCATGAAATCTGATGAACTCCAAGAAGTCATTAACTGGTTACACAACGATGTAGATAAAGCCGTTGAT GATGCCAATGATGTAGTTGC
Product: putative helix-destabilizing protein
Products: NA
Alternate protein names: Fumarate Reductase Subunit C; RstB1 Protein
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MLKVEIFPEHEQPITRTLPGKDGKQARTIREQIGYAYLGGKFPVEMKLSLQDDQSAYKSGNYELDSSSFTVNNFGGLELK RFGIKLARSMK
Sequences:
>Translated_91_residues MLKVEIFPEHEQPITRTLPGKDGKQARTIREQIGYAYLGGKFPVEMKLSLQDDQSAYKSGNYELDSSSFTVNNFGGLELK RFGIKLARSMK >Mature_91_residues MLKVEIFPEHEQPITRTLPGKDGKQARTIREQIGYAYLGGKFPVEMKLSLQDDQSAYKSGNYELDSSSFTVNNFGGLELK RFGIKLARSMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10301; Mature: 10301
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVEIFPEHEQPITRTLPGKDGKQARTIREQIGYAYLGGKFPVEMKLSLQDDQSAYKSG CEEEEECCCCCCCCEECCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEEECCCCHHHCCC NYELDSSSFTVNNFGGLELKRFGIKLARSMK CEEECCCCEEECCCCCCEEHHHHHHHHHCCC >Mature Secondary Structure MLKVEIFPEHEQPITRTLPGKDGKQARTIREQIGYAYLGGKFPVEMKLSLQDDQSAYKSG CEEEEECCCCCCCCEECCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEEECCCCHHHCCC NYELDSSSFTVNNFGGLELKRFGIKLARSMK CEEECCCCEEECCCCCCEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA