| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709433
Identifier: 218709433
GI number: 218709433
Start: 1580365
End: 1581402
Strand: Direct
Name: 218709433
Synonym: VS_1442
Alternate gene names: NA
Gene position: 1580365-1581402 (Clockwise)
Preceding gene: 218709432
Following gene: 218709434
Centisome position: 47.9
GC content: 34.87
Gene sequence:
>1038_bases TTGGCACTTTTAGATTTCACTCAGTTCATAAAGCAGCAAATGTGCCTTGCCTGCACGTTTATTATACAGTTATTGGTTTG GTTTTTAATGAAAGAAAATTTTTTGAATTTTATAAAGCAACGTAATGCAAATTTCTATACAGCAACTGGTGGTTTTTTAT TGTCATTAGGTTGTGCCTACGTCGGTAATTACAACTTTACAACAGAGTCCGAAAAGATCACATCTGCTGATACACTTATC GCATTTATCCTAACAAGTCCACACTTCGGTATTATTTTAGGTGGTTTATTTATGGCGTTAGGTGCAAGTTCTAATCATTT ACTGCAAGGTGAATTAAATACAGAAAATGAACGTTTGAAAAGTAGGAATTTGAAGTTTGAACAGGAGTTATCAGAAGTTC CGTTGTTAAAGCAAAGAATAAGCAAGTCTCAAGAAGATGGTCTCCAATTAAAAGTTGAAAACTACAAGCTCCATGAGAAG CAAGTAGAAACATGGCTCAAAGGTATCTGTAAGCATATAGAACTAGATTATGAGTCTCGAGTATCCATTTATTACAAGGA TGGTTCGGTATTTAAACTACTTGCGAGAAATTCTTCAAATCCGTTACTAAAACAGTTTAGTCGTAAAGATTACCCTTTGG ATTTAGGGATTGTAAGTAAAGCTTGGCAATACGGGAAATACGAAGATAAAGAAATCCCAGAAGATGAAGATGCATACTTA GAGTACATGCAAAAAAAGTATCAATACTCCGAGGAGATTTTATATAGCATTCGAATGAAAAGTAGAACGATGCTTGGTTT GTCGATTGTTGATGCCGACGATAGCATAGGTGTGATACTCTTTGAAAGTAAGATTAAGAATGCTTTTGATAGAGACACAA TTGATGCTATGGAACGCTATTGTAAAGATTTTCAGAGTTACTTAGCTGGTTTTGTACGAGATTGTAAGGTTTATGAAAAG CGAGCAAGACCAGAAAGAACCATTGAAAATGCTCAGACACATAAGAATATCCTTGAGGAACTAGGAGGTAAAATATGA
Upstream 100 bases:
>100_bases GTGTTTGACGGATCACGGAGATCAAGTAATGGTTGGACTGCGTGCTATAAAAAAATAATTTTGCTCGTTGAATGCCAATG AGTTTGAAGATTGACACTCA
Downstream 100 bases:
>100_bases ATGAACTTTCTAATATTGTTGCATATTTATGCCATACATATCCTCATAAGCATGAGTTAAGTAAGGCTCGGCTAACTAAA TTAGTATACTTGGCAGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MALLDFTQFIKQQMCLACTFIIQLLVWFLMKENFLNFIKQRNANFYTATGGFLLSLGCAYVGNYNFTTESEKITSADTLI AFILTSPHFGIILGGLFMALGASSNHLLQGELNTENERLKSRNLKFEQELSEVPLLKQRISKSQEDGLQLKVENYKLHEK QVETWLKGICKHIELDYESRVSIYYKDGSVFKLLARNSSNPLLKQFSRKDYPLDLGIVSKAWQYGKYEDKEIPEDEDAYL EYMQKKYQYSEEILYSIRMKSRTMLGLSIVDADDSIGVILFESKIKNAFDRDTIDAMERYCKDFQSYLAGFVRDCKVYEK RARPERTIENAQTHKNILEELGGKI
Sequences:
>Translated_345_residues MALLDFTQFIKQQMCLACTFIIQLLVWFLMKENFLNFIKQRNANFYTATGGFLLSLGCAYVGNYNFTTESEKITSADTLI AFILTSPHFGIILGGLFMALGASSNHLLQGELNTENERLKSRNLKFEQELSEVPLLKQRISKSQEDGLQLKVENYKLHEK QVETWLKGICKHIELDYESRVSIYYKDGSVFKLLARNSSNPLLKQFSRKDYPLDLGIVSKAWQYGKYEDKEIPEDEDAYL EYMQKKYQYSEEILYSIRMKSRTMLGLSIVDADDSIGVILFESKIKNAFDRDTIDAMERYCKDFQSYLAGFVRDCKVYEK RARPERTIENAQTHKNILEELGGKI >Mature_344_residues ALLDFTQFIKQQMCLACTFIIQLLVWFLMKENFLNFIKQRNANFYTATGGFLLSLGCAYVGNYNFTTESEKITSADTLIA FILTSPHFGIILGGLFMALGASSNHLLQGELNTENERLKSRNLKFEQELSEVPLLKQRISKSQEDGLQLKVENYKLHEKQ VETWLKGICKHIELDYESRVSIYYKDGSVFKLLARNSSNPLLKQFSRKDYPLDLGIVSKAWQYGKYEDKEIPEDEDAYLE YMQKKYQYSEEILYSIRMKSRTMLGLSIVDADDSIGVILFESKIKNAFDRDTIDAMERYCKDFQSYLAGFVRDCKVYEKR ARPERTIENAQTHKNILEELGGKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39996; Mature: 39865
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLDFTQFIKQQMCLACTFIIQLLVWFLMKENFLNFIKQRNANFYTATGGFLLSLGCAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH VGNYNFTTESEKITSADTLIAFILTSPHFGIILGGLFMALGASSNHLLQGELNTENERLK HCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH SRNLKFEQELSEVPLLKQRISKSQEDGLQLKVENYKLHEKQVETWLKGICKHIELDYESR HCCCCHHHHHHHCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCC VSIYYKDGSVFKLLARNSSNPLLKQFSRKDYPLDLGIVSKAWQYGKYEDKEIPEDEDAYL EEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH EYMQKKYQYSEEILYSIRMKSRTMLGLSIVDADDSIGVILFESKIKNAFDRDTIDAMERY HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEHHHHHHHHCHHHHHHHHHH CKDFQSYLAGFVRDCKVYEKRARPERTIENAQTHKNILEELGGKI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALLDFTQFIKQQMCLACTFIIQLLVWFLMKENFLNFIKQRNANFYTATGGFLLSLGCAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH VGNYNFTTESEKITSADTLIAFILTSPHFGIILGGLFMALGASSNHLLQGELNTENERLK HCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHH SRNLKFEQELSEVPLLKQRISKSQEDGLQLKVENYKLHEKQVETWLKGICKHIELDYESR HCCCCHHHHHHHCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCC VSIYYKDGSVFKLLARNSSNPLLKQFSRKDYPLDLGIVSKAWQYGKYEDKEIPEDEDAYL EEEEEECCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH EYMQKKYQYSEEILYSIRMKSRTMLGLSIVDADDSIGVILFESKIKNAFDRDTIDAMERY HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEHHHHHHHHCHHHHHHHHHH CKDFQSYLAGFVRDCKVYEKRARPERTIENAQTHKNILEELGGKI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA