| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709431
Identifier: 218709431
GI number: 218709431
Start: 1578665
End: 1579141
Strand: Direct
Name: 218709431
Synonym: VS_1440
Alternate gene names: NA
Gene position: 1578665-1579141 (Clockwise)
Preceding gene: 218709430
Following gene: 218709432
Centisome position: 47.85
GC content: 36.27
Gene sequence:
>477_bases ATGCATGAGCATCAAGATCCAATGACTGGTATTCGAATATTAGAAGAACAGTTGGCGGAAGGTTTCGTAATGAAAAGAGT TCCATTTACAGATGACATCTACATGATAAAAGACTATCCATTTGGCGGTTTAAGATATACGTATGCAAAGTTGGATAATA AAAAGGTAGCTCATTTAGTAAGCTTTGACATGAATGAACCATTAAATGGTAAGCCGTGTTTTTGTCTATTTTATGGTACG AAAGAGCATCTACGAGGCAAGGGGCTAACATCTAAATTTGTAGCACAAACTATAGAATTGTTTAAAAAAGATCTACCAAA GAAATCTAAATCTTTTTATCTTGAGGCTCTTGTAGAACAAGATATAAAAGCATCTCTCGGTGTAGCATCGCGCCTATTTG GTAATAAAACCACATCAGGTACATGCGAGCTTACAGGTGCTAAAACGGACATTTGGCAAATAGAGTACGCTGGTTAA
Upstream 100 bases:
>100_bases AAATATAGCCACAGAATTTATTAAGATTGTCGAGGATTTTGCAAGGGAACTACAGTCTAAAGTGACTGACGAAATTAATT CACAATAAGGAGTTGTAGGT
Downstream 100 bases:
>100_bases TCATATAAGGCGCGTAAGAAAAATTATCTACTTGGTTTTCTATACGTTGAGTCCAAGTTGACAGTGAAGCAGTCAAGGCT TTGATGATAGCGCTAGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MHEHQDPMTGIRILEEQLAEGFVMKRVPFTDDIYMIKDYPFGGLRYTYAKLDNKKVAHLVSFDMNEPLNGKPCFCLFYGT KEHLRGKGLTSKFVAQTIELFKKDLPKKSKSFYLEALVEQDIKASLGVASRLFGNKTTSGTCELTGAKTDIWQIEYAG
Sequences:
>Translated_158_residues MHEHQDPMTGIRILEEQLAEGFVMKRVPFTDDIYMIKDYPFGGLRYTYAKLDNKKVAHLVSFDMNEPLNGKPCFCLFYGT KEHLRGKGLTSKFVAQTIELFKKDLPKKSKSFYLEALVEQDIKASLGVASRLFGNKTTSGTCELTGAKTDIWQIEYAG >Mature_158_residues MHEHQDPMTGIRILEEQLAEGFVMKRVPFTDDIYMIKDYPFGGLRYTYAKLDNKKVAHLVSFDMNEPLNGKPCFCLFYGT KEHLRGKGLTSKFVAQTIELFKKDLPKKSKSFYLEALVEQDIKASLGVASRLFGNKTTSGTCELTGAKTDIWQIEYAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17941; Mature: 17941
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEHQDPMTGIRILEEQLAEGFVMKRVPFTDDIYMIKDYPFGGLRYTYAKLDNKKVAHLV CCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEE SFDMNEPLNGKPCFCLFYGTKEHLRGKGLTSKFVAQTIELFKKDLPKKSKSFYLEALVEQ EECCCCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DIKASLGVASRLFGNKTTSGTCELTGAKTDIWQIEYAG HHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC >Mature Secondary Structure MHEHQDPMTGIRILEEQLAEGFVMKRVPFTDDIYMIKDYPFGGLRYTYAKLDNKKVAHLV CCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEE SFDMNEPLNGKPCFCLFYGTKEHLRGKGLTSKFVAQTIELFKKDLPKKSKSFYLEALVEQ EECCCCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DIKASLGVASRLFGNKTTSGTCELTGAKTDIWQIEYAG HHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA