| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709416
Identifier: 218709416
GI number: 218709416
Start: 1566972
End: 1567232
Strand: Direct
Name: 218709416
Synonym: VS_1425
Alternate gene names: NA
Gene position: 1566972-1567232 (Clockwise)
Preceding gene: 218709415
Following gene: 218709417
Centisome position: 47.49
GC content: 41.0
Gene sequence:
>261_bases GTGCTGACTCTCTACAGTACAGAAGGGTGCCATCTATGTGAGATGGCATTCAAACTCACGGAACAGTTAAACATTAGCCA TCACGTCAACGTTGTCGACATTGCATTTGATGATGAGCTCTTTTCCCGTTACGGGGTCACTATTCCGGTGCTCAAATTTG AAAGCTCTGACTTTTCTCAAAGCTCAGAGCTTAACTGGCCATTTGGCTTGTTAGAACTTAATGATTGGTTAAAAAAGAAT GGCATTACTTACAATTCATAA
Upstream 100 bases:
>100_bases TCAGCTAAAACGCTTCCATTGGACTTCTCTCGTAACAAGCACATTCATAACTGCTGGTTGATTACGCATAAGTAATTAAG AGATTGTATAAGGATATAGC
Downstream 100 bases:
>100_bases CGGGCAATTAGCGTTTGGCGATCACCCGTTATTAGATCGTGCGGACTTTGCACTGCAAGAAAACGAACGTGTGTGTTTAG TAGGGCGCAATGGCGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutaredoxin-Like Domain-Containing Protein
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MLTLYSTEGCHLCEMAFKLTEQLNISHHVNVVDIAFDDELFSRYGVTIPVLKFESSDFSQSSELNWPFGLLELNDWLKKN GITYNS
Sequences:
>Translated_86_residues MLTLYSTEGCHLCEMAFKLTEQLNISHHVNVVDIAFDDELFSRYGVTIPVLKFESSDFSQSSELNWPFGLLELNDWLKKN GITYNS >Mature_86_residues MLTLYSTEGCHLCEMAFKLTEQLNISHHVNVVDIAFDDELFSRYGVTIPVLKFESSDFSQSSELNWPFGLLELNDWLKKN GITYNS
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9892; Mature: 9892
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLYSTEGCHLCEMAFKLTEQLNISHHVNVVDIAFDDELFSRYGVTIPVLKFESSDFSQ CEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCCEEEEEEECCCCCCC SSELNWPFGLLELNDWLKKNGITYNS CCCCCCCEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure MLTLYSTEGCHLCEMAFKLTEQLNISHHVNVVDIAFDDELFSRYGVTIPVLKFESSDFSQ CEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHCCCEEEEEEECCCCCCC SSELNWPFGLLELNDWLKKNGITYNS CCCCCCCEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA