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The map label for this gene is ycbW [H]

Identifier: 218709414

GI number: 218709414

Start: 1563765

End: 1564316

Strand: Direct

Name: ycbW [H]

Synonym: VS_1423

Alternate gene names: 218709414

Gene position: 1563765-1564316 (Clockwise)

Preceding gene: 218709413

Following gene: 218709415

Centisome position: 47.4

GC content: 44.02

Gene sequence:

>552_bases
ATGCTTAAACCTAGCGATACATGGAGTTGGTATTACGATGAGCAGCAATGTTCATTAATGCTAAACCTCGGAGAGGATAT
GATTTTCAAAACGAATCTGGTCCGCAATAAGCTGGTGGACTGCGCGTTTAGAGATAATGAATTCACCGTTGATGACGCAT
CTTCATACCAAACCTTCAAAGAACAAATTTCTGGCTTAGAACTGTCTGAGCCTCGCCAAGCTGAACTCGCACTATATTGT
GTGGCAGCAAAGCGCTTCCACAAGCCTGTACAGCCTAAAAGCTGGTTCTTCGATTCACAAGGCGCTGGCCACGAATCTCC
TCAAGAAGGGGATATCGTACAAATGAATAACGAGCATAGCCTAGGTTACTTCATTGTATTGGAAGTGGGAGAGTGTGCGA
GCCTATGTGCATTTGTCGACTTAGAGGAGTTTCTGCTCACACCTTCAAAAGGGTTAAGCTTTGGAGACTCGATTAAAGTG
ATGCACGATAGGATGGTAGACGCGAACTCTATTCTTCATTTTCACCATACACATATTGCAATGGTCGGTTAA

Upstream 100 bases:

>100_bases
TTTCCTCTTTTTTTTTGCCTATTGCTCAGTAAAATTACTGTAATTGAAGGTAATTTTGCGTTTTACCTAATGGAATGGTT
CAACAGTGTGAGACGAAATG

Downstream 100 bases:

>100_bases
TTCCCCAGTTTAGTTCATCATTTCTAACACACATTGCAACGCATAAACCTATCAAACCTTCCTTAGAATCGGCTCAATAG
CCGATTTTTTTGTGCCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLKPSDTWSWYYDEQQCSLMLNLGEDMIFKTNLVRNKLVDCAFRDNEFTVDDASSYQTFKEQISGLELSEPRQAELALYC
VAAKRFHKPVQPKSWFFDSQGAGHESPQEGDIVQMNNEHSLGYFIVLEVGECASLCAFVDLEEFLLTPSKGLSFGDSIKV
MHDRMVDANSILHFHHTHIAMVG

Sequences:

>Translated_183_residues
MLKPSDTWSWYYDEQQCSLMLNLGEDMIFKTNLVRNKLVDCAFRDNEFTVDDASSYQTFKEQISGLELSEPRQAELALYC
VAAKRFHKPVQPKSWFFDSQGAGHESPQEGDIVQMNNEHSLGYFIVLEVGECASLCAFVDLEEFLLTPSKGLSFGDSIKV
MHDRMVDANSILHFHHTHIAMVG
>Mature_183_residues
MLKPSDTWSWYYDEQQCSLMLNLGEDMIFKTNLVRNKLVDCAFRDNEFTVDDASSYQTFKEQISGLELSEPRQAELALYC
VAAKRFHKPVQPKSWFFDSQGAGHESPQEGDIVQMNNEHSLGYFIVLEVGECASLCAFVDLEEFLLTPSKGLSFGDSIKV
MHDRMVDANSILHFHHTHIAMVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=166, Percent_Identity=37.3493975903614, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20834; Mature: 20834

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPSDTWSWYYDEQQCSLMLNLGEDMIFKTNLVRNKLVDCAFRDNEFTVDDASSYQTFK
CCCCCCCEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHEEECCCCEEECCCHHHHHHH
EQISGLELSEPRQAELALYCVAAKRFHKPVQPKSWFFDSQGAGHESPQEGDIVQMNNEHS
HHHCCCCCCCCCCHHEEHHEEEHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCC
LGYFIVLEVGECASLCAFVDLEEFLLTPSKGLSFGDSIKVMHDRMVDANSILHFHHTHIA
CEEEEEEECCCHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECEEEE
MVG
EEC
>Mature Secondary Structure
MLKPSDTWSWYYDEQQCSLMLNLGEDMIFKTNLVRNKLVDCAFRDNEFTVDDASSYQTFK
CCCCCCCEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHHEEECCCCEEECCCHHHHHHH
EQISGLELSEPRQAELALYCVAAKRFHKPVQPKSWFFDSQGAGHESPQEGDIVQMNNEHS
HHHCCCCCCCCCCHHEEHHEEEHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCC
LGYFIVLEVGECASLCAFVDLEEFLLTPSKGLSFGDSIKVMHDRMVDANSILHFHHTHIA
CEEEEEEECCCHHHHHHHHCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECEEEE
MVG
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]