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The map label for this gene is yccA [H]

Identifier: 218709390

GI number: 218709390

Start: 1529344

End: 1530009

Strand: Reverse

Name: yccA [H]

Synonym: VS_1399

Alternate gene names: 218709390

Gene position: 1530009-1529344 (Counterclockwise)

Preceding gene: 218709391

Following gene: 218709389

Centisome position: 46.37

GC content: 44.59

Gene sequence:

>666_bases
ATGAACAGCCCTATGTTTTCACGCACAGCATCTCAAGAAAGTGCTCTGCAAACCAATAAAGTGTTGCGTAACACCTACGC
ACTACTGTCTATGACACTACTTTGGTCTGCTGTAGTAGCAGGCGTATCTATGGCGATGAACCTTCCTCGCCCTGGTCTTA
TCATTATGCTAGTTGGTTTCTACGGCCTTCTATTCCTAACAGAAAAGAACCGTGACAACAGCATGGGTCTAGTCTTCACA
TTCCTATTTACAGGTTTCTTAGGCTACACCATCGGTCCAATCTTAAACATGTACGTTGGCGCAGGCATGGGTGATGTCAT
CCTAACTGCACTTGGCGGTACTGCACTGGCATTTATGGCTGCATCTGCTTACGCCCTAACAACTAAACGTGACCTTTCAT
TCCTTAACGGTATGCTAATGGCTGGTTTCGTTGTTCTGCTAGTCGGCATGGTTGCAAACATCTTCCTACAAATGCCACTA
CTATCACTGGCAATGAGCGGTATGTTTATCCTATTCTCGACTGGTGTAATCTTGCTAACAACGCAAAGCATCATTCGTGG
TGGTGAAACGAACTACATCTCTGCAACGATTAGCTTGTATGTTTCTATCTACAACATCTTCATCAGCCTACTAAGCATCT
TAGGCATTATGGGTAACGACGACTAA

Upstream 100 bases:

>100_bases
ATTATTTTAGGTATACAAGAGGAATGAAAGACTTGATTTTTCGAACTTTCAGCCCCATAAATGTACTAATAACTATTGAA
GTCACCTTACGAGGAAGATT

Downstream 100 bases:

>100_bases
TCGCTTCCATCACTGAATCATATCTAGCCCAAGAGCCTATCTCTTGGGCTTTTTTTATCCATAAGTGCAATATTTTTTGA
GATAGCTACAATTTCTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNSPMFSRTASQESALQTNKVLRNTYALLSMTLLWSAVVAGVSMAMNLPRPGLIIMLVGFYGLLFLTEKNRDNSMGLVFT
FLFTGFLGYTIGPILNMYVGAGMGDVILTALGGTALAFMAASAYALTTKRDLSFLNGMLMAGFVVLLVGMVANIFLQMPL
LSLAMSGMFILFSTGVILLTTQSIIRGGETNYISATISLYVSIYNIFISLLSILGIMGNDD

Sequences:

>Translated_221_residues
MNSPMFSRTASQESALQTNKVLRNTYALLSMTLLWSAVVAGVSMAMNLPRPGLIIMLVGFYGLLFLTEKNRDNSMGLVFT
FLFTGFLGYTIGPILNMYVGAGMGDVILTALGGTALAFMAASAYALTTKRDLSFLNGMLMAGFVVLLVGMVANIFLQMPL
LSLAMSGMFILFSTGVILLTTQSIIRGGETNYISATISLYVSIYNIFISLLSILGIMGNDD
>Mature_221_residues
MNSPMFSRTASQESALQTNKVLRNTYALLSMTLLWSAVVAGVSMAMNLPRPGLIIMLVGFYGLLFLTEKNRDNSMGLVFT
FLFTGFLGYTIGPILNMYVGAGMGDVILTALGGTALAFMAASAYALTTKRDLSFLNGMLMAGFVVLLVGMVANIFLQMPL
LSLAMSGMFILFSTGVILLTTQSIIRGGETNYISATISLYVSIYNIFISLLSILGIMGNDD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=214, Percent_Identity=63.0841121495327, Blast_Score=262, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23746; Mature: 23746

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS01243 BI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPMFSRTASQESALQTNKVLRNTYALLSMTLLWSAVVAGVSMAMNLPRPGLIIMLVGF
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YGLLFLTEKNRDNSMGLVFTFLFTGFLGYTIGPILNMYVGAGMGDVILTALGGTALAFMA
HHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASAYALTTKRDLSFLNGMLMAGFVVLLVGMVANIFLQMPLLSLAMSGMFILFSTGVILLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
TQSIIRGGETNYISATISLYVSIYNIFISLLSILGIMGNDD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSPMFSRTASQESALQTNKVLRNTYALLSMTLLWSAVVAGVSMAMNLPRPGLIIMLVGF
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YGLLFLTEKNRDNSMGLVFTFLFTGFLGYTIGPILNMYVGAGMGDVILTALGGTALAFMA
HHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASAYALTTKRDLSFLNGMLMAGFVVLLVGMVANIFLQMPLLSLAMSGMFILFSTGVILLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
TQSIIRGGETNYISATISLYVSIYNIFISLLSILGIMGNDD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]