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The map label for this gene is 218709380

Identifier: 218709380

GI number: 218709380

Start: 1513240

End: 1514745

Strand: Reverse

Name: 218709380

Synonym: VS_1389

Alternate gene names: NA

Gene position: 1514745-1513240 (Counterclockwise)

Preceding gene: 218709381

Following gene: 218709379

Centisome position: 45.91

GC content: 35.52

Gene sequence:

>1506_bases
ATGTCATATAAGTCAGTGAACGAGACACGCATATTGAACATTCCAATTGCTCGGGAGTTAATGTCACGGCTAGTAGCTAA
CCCAAGTAAAAGTTCACAGTATGAAAAGTTAATTTCACATGATGGTACTGAATTGAATAAAGGATTTCATCACATTACAG
AATTAGGTAATGATCGCGATGTTTATAATATGCCCTTCCTTGTCAGAGAGGATCATACACCTTGGCTCGAGGCTAATTCA
TACCTTTGCCACCTAATAGAACATCAAAGCTCAAATTACAGGCCAACCGACAAGATTAGTCGTATTGCTTCATCCTTATT
GCAATATAAAGTATTTACTGAGACCGAAGGGATCGATTATTTAGATTTCAAAGGAAAAAGGTTAAGCCAAAGACCTACTG
CAAGATATTATACATATCTAAAAAATAAGTTAGGGTATAAGCCAAGAGTTCTAAATATTCATACACAGTCAGTCTATGAT
TTCTTAGTATACATTTCCGAGAACTGGCCTGAGCATTGCGTCGATAAAAAACGAATTGATAACGTTAGATCTGTTTCCAT
GTGGTACCAAGCAGCGAATGGTCATCGTATTCAAACTACTTATAATCAGAGACGGCTCTCTAGTAAAACAGGCCGACCTT
CTACCCCTCCTTTGCAAACCGTGAGAGATGAAGGCGAAGATCTAAGGCCATTATCACTAAAGCAATTCAAAGACCTAAGA
ATAGCTCTAGAGCTAAATAAATGGAGTACACAGGAACGTCTTATTATACAGACAGCATACAAAGTCGGAGCTCGAAAGCA
GAGCATTCTAACTATTAGGCTTGGCGATATAAAATCTTGGTATAGTTCGGATATTGGAAATACAGGCACAATAGAGGTGA
AAGCTGGCCCTGGAACAAATATCAATACAAAAAATGATATGCCACTAACACTTTATTTCCCTAAAGCGCTAGTTGAATCG
CTTTATACTTATGCTATGTCTGAGACAGCAAATAAAAGAAGAAGCAAGTTTAAAGAAAACTTTACAAAAACATACCCTAA
TTTAGAAGTGATGGATGAGGATAATATTTACTTATTTTTATCTGACCAAGGTAATTGTTATTACATGGCTAAAGATGACC
CTCGATACAAATATATAAAGTCTACACCTAAAGGGCAAGTATCTAAAAATTTTCAGAATAAAATTCAACGACTTACCCCT
GACACTTTCCCTTCTGACTTCACTTTTCACTGGTTAAGAGCAACCTTTGGTTATCTACTATATGTAGCTATCAAGAAAAA
AATAAAAATCTTAACTGATAATGGCGTGCTTCATGAAAATGAGGTAACAGATAGTGACATTATTACTATCATACAAGACA
GAATGGGACATCGCGATAGAACCATAACAGAAAGCTACCTAAAACTTTTTAAAAATGTTGATGTTCGACTAAAAATCCAA
GAAATATTTGAAGATACATTTATTAACATTGAAGTTGACAGCCTAATTTTAGAATTTCCCCAATGA

Upstream 100 bases:

>100_bases
GTCGTTGACACAAGCTTCATCACGTAACATACAAAATTGACAAAAACACATCATTACCTAGACTAAAAAACAATCGATAG
TATTTTTTAATAAGGTAAAT

Downstream 100 bases:

>100_bases
CTGAAAAATACACTGAAATCATCCCTATTAAATACCATGAACTAAGGTCACCATCATTGGTCAGTAACGTCTTAACTGAT
GGGCTCAAGTTTGAAGATTA

Product: putative site-specific recombinase

Products: NA

Alternate protein names: Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Integrase; Site-Specific Recombinase; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSYKSVNETRILNIPIARELMSRLVANPSKSSQYEKLISHDGTELNKGFHHITELGNDRDVYNMPFLVREDHTPWLEANS
YLCHLIEHQSSNYRPTDKISRIASSLLQYKVFTETEGIDYLDFKGKRLSQRPTARYYTYLKNKLGYKPRVLNIHTQSVYD
FLVYISENWPEHCVDKKRIDNVRSVSMWYQAANGHRIQTTYNQRRLSSKTGRPSTPPLQTVRDEGEDLRPLSLKQFKDLR
IALELNKWSTQERLIIQTAYKVGARKQSILTIRLGDIKSWYSSDIGNTGTIEVKAGPGTNINTKNDMPLTLYFPKALVES
LYTYAMSETANKRRSKFKENFTKTYPNLEVMDEDNIYLFLSDQGNCYYMAKDDPRYKYIKSTPKGQVSKNFQNKIQRLTP
DTFPSDFTFHWLRATFGYLLYVAIKKKIKILTDNGVLHENEVTDSDIITIIQDRMGHRDRTITESYLKLFKNVDVRLKIQ
EIFEDTFINIEVDSLILEFPQ

Sequences:

>Translated_501_residues
MSYKSVNETRILNIPIARELMSRLVANPSKSSQYEKLISHDGTELNKGFHHITELGNDRDVYNMPFLVREDHTPWLEANS
YLCHLIEHQSSNYRPTDKISRIASSLLQYKVFTETEGIDYLDFKGKRLSQRPTARYYTYLKNKLGYKPRVLNIHTQSVYD
FLVYISENWPEHCVDKKRIDNVRSVSMWYQAANGHRIQTTYNQRRLSSKTGRPSTPPLQTVRDEGEDLRPLSLKQFKDLR
IALELNKWSTQERLIIQTAYKVGARKQSILTIRLGDIKSWYSSDIGNTGTIEVKAGPGTNINTKNDMPLTLYFPKALVES
LYTYAMSETANKRRSKFKENFTKTYPNLEVMDEDNIYLFLSDQGNCYYMAKDDPRYKYIKSTPKGQVSKNFQNKIQRLTP
DTFPSDFTFHWLRATFGYLLYVAIKKKIKILTDNGVLHENEVTDSDIITIIQDRMGHRDRTITESYLKLFKNVDVRLKIQ
EIFEDTFINIEVDSLILEFPQ
>Mature_500_residues
SYKSVNETRILNIPIARELMSRLVANPSKSSQYEKLISHDGTELNKGFHHITELGNDRDVYNMPFLVREDHTPWLEANSY
LCHLIEHQSSNYRPTDKISRIASSLLQYKVFTETEGIDYLDFKGKRLSQRPTARYYTYLKNKLGYKPRVLNIHTQSVYDF
LVYISENWPEHCVDKKRIDNVRSVSMWYQAANGHRIQTTYNQRRLSSKTGRPSTPPLQTVRDEGEDLRPLSLKQFKDLRI
ALELNKWSTQERLIIQTAYKVGARKQSILTIRLGDIKSWYSSDIGNTGTIEVKAGPGTNINTKNDMPLTLYFPKALVESL
YTYAMSETANKRRSKFKENFTKTYPNLEVMDEDNIYLFLSDQGNCYYMAKDDPRYKYIKSTPKGQVSKNFQNKIQRLTPD
TFPSDFTFHWLRATFGYLLYVAIKKKIKILTDNGVLHENEVTDSDIITIIQDRMGHRDRTITESYLKLFKNVDVRLKIQE
IFEDTFINIEVDSLILEFPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58574; Mature: 58443

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKSVNETRILNIPIARELMSRLVANPSKSSQYEKLISHDGTELNKGFHHITELGNDRD
CCCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
VYNMPFLVREDHTPWLEANSYLCHLIEHQSSNYRPTDKISRIASSLLQYKVFTETEGIDY
EECCCEEEECCCCCCCCCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCE
LDFKGKRLSQRPTARYYTYLKNKLGYKPRVLNIHTQSVYDFLVYISENWPEHCVDKKRID
EECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHEECCCCCHHHHCHHHHC
NVRSVSMWYQAANGHRIQTTYNQRRLSSKTGRPSTPPLQTVRDEGEDLRPLSLKQFKDLR
CHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCEE
IALELNKWSTQERLIIQTAYKVGARKQSILTIRLGDIKSWYSSDIGNTGTIEVKAGPGTN
EEEEECCCCCCHHEEEHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCCCEEEEECCCCCC
INTKNDMPLTLYFPKALVESLYTYAMSETANKRRSKFKENFTKTYPNLEVMDEDNIYLFL
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE
SDQGNCYYMAKDDPRYKYIKSTPKGQVSKNFQNKIQRLTPDTFPSDFTFHWLRATFGYLL
ECCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
YVAIKKKIKILTDNGVLHENEVTDSDIITIIQDRMGHRDRTITESYLKLFKNVDVRLKIQ
HHHHHHEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHH
EIFEDTFINIEVDSLILEFPQ
HHHCCCEEEEEEHHEEEECCC
>Mature Secondary Structure 
SYKSVNETRILNIPIARELMSRLVANPSKSSQYEKLISHDGTELNKGFHHITELGNDRD
CCCCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
VYNMPFLVREDHTPWLEANSYLCHLIEHQSSNYRPTDKISRIASSLLQYKVFTETEGIDY
EECCCEEEECCCCCCCCCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCE
LDFKGKRLSQRPTARYYTYLKNKLGYKPRVLNIHTQSVYDFLVYISENWPEHCVDKKRID
EECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHEECCCCCHHHHCHHHHC
NVRSVSMWYQAANGHRIQTTYNQRRLSSKTGRPSTPPLQTVRDEGEDLRPLSLKQFKDLR
CHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCEE
IALELNKWSTQERLIIQTAYKVGARKQSILTIRLGDIKSWYSSDIGNTGTIEVKAGPGTN
EEEEECCCCCCHHEEEHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCCCEEEEECCCCCC
INTKNDMPLTLYFPKALVESLYTYAMSETANKRRSKFKENFTKTYPNLEVMDEDNIYLFL
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE
SDQGNCYYMAKDDPRYKYIKSTPKGQVSKNFQNKIQRLTPDTFPSDFTFHWLRATFGYLL
ECCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
YVAIKKKIKILTDNGVLHENEVTDSDIITIIQDRMGHRDRTITESYLKLFKNVDVRLKIQ
HHHHHHEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHH
EIFEDTFINIEVDSLILEFPQ
HHHCCCEEEEEEHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA