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The map label for this gene is 218709326

Identifier: 218709326

GI number: 218709326

Start: 1442749

End: 1443048

Strand: Reverse

Name: 218709326

Synonym: VS_1335

Alternate gene names: NA

Gene position: 1443048-1442749 (Counterclockwise)

Preceding gene: 218709327

Following gene: 218709325

Centisome position: 43.74

GC content: 51.67

Gene sequence:

>300_bases
ATGACGTTAGCCGCAAGATTAACTGACATGCATGTTTGCCCGATGCAGACACCCGCACTTCCACCAATCCCCCATGTCGG
AGGCCCAATCGTTGGACCTGGTGTACCGACGGTTCTCATTGGCAATATGCCTGCAGCAACGCTTGGGGATATGTGTGTTT
GTGTTGGCCCCCCAGATAGCATCATCAAAGGCAGTGCTACTGTACTTATCATGAATAAGCCTGCTGCGCGTATGGGAGAT
ACAACCGCCCACGGGGGTACTATTGTCTTGGGTATGCCTACCGTAATGATTGGAGGATAA

Upstream 100 bases:

>100_bases
TTGGGATAAAACCAACGAGTACTATAAGAAATCCATTGGTATTGCTCTCGAGCTTGCCAAAGGCAGCCAATCATAAAGTT
ACAGATGACAGGAGTGGCCG

Downstream 100 bases:

>100_bases
AATCCTTGCATTTCATAAGGTTTCGAAAAGTCGGCTTACTGGGTAATTTTCTTGGATAAAGTTCAAATTTTTGAGTAAAT
ATCTATTTTACATAGGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Protein EvpJ; PAAR Motif Family; Type VI Secretion PAAR Domain Protein; PAAR Domain-Containing Protein Containing Protein; Superfamily II DNA Helicase

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTLAARLTDMHVCPMQTPALPPIPHVGGPIVGPGVPTVLIGNMPAATLGDMCVCVGPPDSIIKGSATVLIMNKPAARMGD
TTAHGGTIVLGMPTVMIGG

Sequences:

>Translated_99_residues
MTLAARLTDMHVCPMQTPALPPIPHVGGPIVGPGVPTVLIGNMPAATLGDMCVCVGPPDSIIKGSATVLIMNKPAARMGD
TTAHGGTIVLGMPTVMIGG
>Mature_98_residues
TLAARLTDMHVCPMQTPALPPIPHVGGPIVGPGVPTVLIGNMPAATLGDMCVCVGPPDSIIKGSATVLIMNKPAARMGDT
TAHGGTIVLGMPTVMIGG

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9880; Mature: 9749

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
9.1 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAARLTDMHVCPMQTPALPPIPHVGGPIVGPGVPTVLIGNMPAATLGDMCVCVGPPDS
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCH
IIKGSATVLIMNKPAARMGDTTAHGGTIVLGMPTVMIGG
HCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEECC
>Mature Secondary Structure 
TLAARLTDMHVCPMQTPALPPIPHVGGPIVGPGVPTVLIGNMPAATLGDMCVCVGPPDS
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCH
IIKGSATVLIMNKPAARMGDTTAHGGTIVLGMPTVMIGG
HCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA