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The map label for this gene is 218709323

Identifier: 218709323

GI number: 218709323

Start: 1439991

End: 1440494

Strand: Reverse

Name: 218709323

Synonym: VS_1332

Alternate gene names: NA

Gene position: 1440494-1439991 (Counterclockwise)

Preceding gene: 218709324

Following gene: 218709322

Centisome position: 43.66

GC content: 41.07

Gene sequence:

>504_bases
GTGGCACTAAATTCCCAACATAAACGCGTAAGTAAGAACCGCGTAAGTATTACCTATGACGTTGAGACTAATGGCGCTGT
AGAAACCAAAGAGCTCCCTTTTGTTGTTGGGGTTATTGGTGACTACTCAGGCCATAAGCAAGACAAAGAAGAAGTAGAAG
ACCGTACTTTCTACAACGTTGATAAAGACAACTTCGATACTGTAATGAAGCGTGTTGGCCCTGAGTTATCACTAAAAGTA
GACAACGTACTTGCAGGTGATGACAGCCAGTTTGAAGCAAGCCTTAAGTTTGACTCGATGAAAGATTTCGAACCTGAAGC
AATTATCGAGCAAGTTGAACCGCTAAAAAAACTAGTTGAAACCCGTAACCAACTGAAAGTACTTCTTTCTAAAGCCGATC
GTTCTCGTGACCTAGAAAAACTGCTTAAAGAAGTTCTACAAAGTGCAGACACGATTAATGCGCTTTCTGATGAGCTAGGT
ATAAAAGAAGAAGGAGCTGAGTAA

Upstream 100 bases:

>100_bases
GCTGACGGCGGTAAGATCGAGAAAGGCCCTGAAGTTGGCTTCGACGCGACTACAGCTAAAGTCACTTCAACTGCTAAGTA
ATTAATCAAGGAGAGTTAAC

Downstream 100 bases:

>100_bases
TGAGTACTGAAACAGAGAATCAAGCGCAAGCAGAAGCTACAGAAGGCTCACTCAGCTTTCTAGACCGAGCGATTGAAGCA
ACCACTCAAACTCCGGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDYSGHKQDKEEVEDRTFYNVDKDNFDTVMKRVGPELSLKV
DNVLAGDDSQFEASLKFDSMKDFEPEAIIEQVEPLKKLVETRNQLKVLLSKADRSRDLEKLLKEVLQSADTINALSDELG
IKEEGAE

Sequences:

>Translated_167_residues
MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDYSGHKQDKEEVEDRTFYNVDKDNFDTVMKRVGPELSLKV
DNVLAGDDSQFEASLKFDSMKDFEPEAIIEQVEPLKKLVETRNQLKVLLSKADRSRDLEKLLKEVLQSADTINALSDELG
IKEEGAE
>Mature_166_residues
ALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDYSGHKQDKEEVEDRTFYNVDKDNFDTVMKRVGPELSLKVD
NVLAGDDSQFEASLKFDSMKDFEPEAIIEQVEPLKKLVETRNQLKVLLSKADRSRDLEKLLKEVLQSADTINALSDELGI
KEEGAE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18832; Mature: 18701

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDYSGHKQDKEEVEDRTFYNV
CCCCCHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCC
DKDNFDTVMKRVGPELSLKVDNVLAGDDSQFEASLKFDSMKDFEPEAIIEQVEPLKKLVE
CCCCHHHHHHHHCCCCEEEECCEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TRNQLKVLLSKADRSRDLEKLLKEVLQSADTINALSDELGIKEEGAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDYSGHKQDKEEVEDRTFYNV
CCCCHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCC
DKDNFDTVMKRVGPELSLKVDNVLAGDDSQFEASLKFDSMKDFEPEAIIEQVEPLKKLVE
CCCCHHHHHHHHCCCCEEEECCEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TRNQLKVLLSKADRSRDLEKLLKEVLQSADTINALSDELGIKEEGAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA