Click here to switch to the map view.

The map label for this gene is 218709321

Identifier: 218709321

GI number: 218709321

Start: 1437078

End: 1438532

Strand: Reverse

Name: 218709321

Synonym: VS_1330

Alternate gene names: NA

Gene position: 1438532-1437078 (Counterclockwise)

Preceding gene: 218709322

Following gene: 218709320

Centisome position: 43.6

GC content: 40.96

Gene sequence:

>1455_bases
TTGCTAAGATTCCTGGTTAATAGGGATTTGGCCGGAGTAATCCGGCCAAAATTTTTTATGAAGTTAGATACGGAATGGCA
AAACAAATTTAACCAACTAGATAATACAGATAATACCTTTATAAAAGAGGCTTTATCTCTATTATCTGAGCTAGACCAAC
ACTCTTTACGCTCTAAATCCTCATTGATTTCATTGATATCCACACTAATATCGAAGATTGATACTGCACTCAGTTTACAG
CTCGATGCAATAATTCAAGAGCCTGATTTTCAAAAGTTAGAACGCAACTGGTTAAGTCTTCAGCAACTTGTATCTTTGCC
CATAAGCTACCAAAGAGCTCATGTAAAATTACTCGATATGAATTGGACTGAGATATCCAGCGATGTCAATCAAGCGTACT
CAACAAAATCCAGCGATTTGTATAACAAGATAGGTAATAGCGAGCTAAATACTTTAGGGGGTCACCCCTTTGGATGCATC
ACATTTAGCCACCCTATCTCGATGGACATCGATTTTGATGCCAATTATGACGACCTATTTACCGTAGAACTGTTAGGTAA
ATTAGGAGAAGCGACGCTTTGCCCGATGCTTTTCTCTCCAGTACCAACGTTTTTTGGTGAAAATGGTGCAGACTGGCTCT
CTGATATAACGCGAATCAATAAAATTCTATCCGGTCCTGATTTCAAAGCATGGCAAGACCTACGCAGTAAACCAAGTTCA
CGCTTTATTGGCATGGCGCTACCTCAGGTTCGTCTTCGTGATGCATACAAAAATCGACGAGTCGGCTTTGTTTATAATGA
ACAAGGCAAAGGCTCATGGGGCTTAGCCAATATGGTACTAGCTACTACAATCATGCGGGAATTTCATCGTGTGAACTGGT
TCGGTTTTCTGAAGTCTCGCTGGAATGACAAGCTGCAAGGCTCTGTTATTAACCTCCCTGCGAGCCACTATTTTGACAGC
CACCTGCAAAAGCCAGTAGCGGATGTTAGCTTATTCGGGCAACTGTCTAATTTTTACGCGCAAAGTGGCTTTATTCCATT
AACCAAAAGCCCTTTAACCGATAAGTTTTACTTCAATGGCAATAACTCTATTTGGCAGTGTGGACAGAACGATAATGACA
AAGTGTTAACTCAGATTCAGACTACGCTAATGTCTTGCAGAATTGCCCATTATCTAAAAGTGCAAGTGCGTGAGATGGTC
GGCAGTTTCAACAGTGCCAACGAATGTGAGCTATTTTTAACAAACTGGATCGAAAAATTTTCCAGCAATGTCTCATTTGC
AAATGAAGAAACCTTGTCCAAATATCCATTGAGCTTTGCCAAAGTTAGTGTCAGGGAATCTCATTCTCAAGCTGGCAGTT
TTGCCTGCACTCTGCGTATCGTTCCTCAATACCAATTTGATTACTTTAGTGGCGAGGTTGTGCTGACTACCGATCTAAAC
GAGGTAGCATCATGA

Upstream 100 bases:

>100_bases
GAAGTGGTTGAGCAACCTGGTAAGCCAGGTGCCTACTCAGCTGTGGCTCACCTAAGACCTTGGTTACAACTTGAAGAGCT
GACAACCTCAGTTCGAATGG

Downstream 100 bases:

>100_bases
GTTTTTGGAAAACCTTTATCAGCGATGCAAAGCCCTATCAGGACGCCGAGATTGAAGATATTAAGTTCCACCTAACCAAG
CTCTTAGAGGCAGAGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MLRFLVNRDLAGVIRPKFFMKLDTEWQNKFNQLDNTDNTFIKEALSLLSELDQHSLRSKSSLISLISTLISKIDTALSLQ
LDAIIQEPDFQKLERNWLSLQQLVSLPISYQRAHVKLLDMNWTEISSDVNQAYSTKSSDLYNKIGNSELNTLGGHPFGCI
TFSHPISMDIDFDANYDDLFTVELLGKLGEATLCPMLFSPVPTFFGENGADWLSDITRINKILSGPDFKAWQDLRSKPSS
RFIGMALPQVRLRDAYKNRRVGFVYNEQGKGSWGLANMVLATTIMREFHRVNWFGFLKSRWNDKLQGSVINLPASHYFDS
HLQKPVADVSLFGQLSNFYAQSGFIPLTKSPLTDKFYFNGNNSIWQCGQNDNDKVLTQIQTTLMSCRIAHYLKVQVREMV
GSFNSANECELFLTNWIEKFSSNVSFANEETLSKYPLSFAKVSVRESHSQAGSFACTLRIVPQYQFDYFSGEVVLTTDLN
EVAS

Sequences:

>Translated_484_residues
MLRFLVNRDLAGVIRPKFFMKLDTEWQNKFNQLDNTDNTFIKEALSLLSELDQHSLRSKSSLISLISTLISKIDTALSLQ
LDAIIQEPDFQKLERNWLSLQQLVSLPISYQRAHVKLLDMNWTEISSDVNQAYSTKSSDLYNKIGNSELNTLGGHPFGCI
TFSHPISMDIDFDANYDDLFTVELLGKLGEATLCPMLFSPVPTFFGENGADWLSDITRINKILSGPDFKAWQDLRSKPSS
RFIGMALPQVRLRDAYKNRRVGFVYNEQGKGSWGLANMVLATTIMREFHRVNWFGFLKSRWNDKLQGSVINLPASHYFDS
HLQKPVADVSLFGQLSNFYAQSGFIPLTKSPLTDKFYFNGNNSIWQCGQNDNDKVLTQIQTTLMSCRIAHYLKVQVREMV
GSFNSANECELFLTNWIEKFSSNVSFANEETLSKYPLSFAKVSVRESHSQAGSFACTLRIVPQYQFDYFSGEVVLTTDLN
EVAS
>Mature_484_residues
MLRFLVNRDLAGVIRPKFFMKLDTEWQNKFNQLDNTDNTFIKEALSLLSELDQHSLRSKSSLISLISTLISKIDTALSLQ
LDAIIQEPDFQKLERNWLSLQQLVSLPISYQRAHVKLLDMNWTEISSDVNQAYSTKSSDLYNKIGNSELNTLGGHPFGCI
TFSHPISMDIDFDANYDDLFTVELLGKLGEATLCPMLFSPVPTFFGENGADWLSDITRINKILSGPDFKAWQDLRSKPSS
RFIGMALPQVRLRDAYKNRRVGFVYNEQGKGSWGLANMVLATTIMREFHRVNWFGFLKSRWNDKLQGSVINLPASHYFDS
HLQKPVADVSLFGQLSNFYAQSGFIPLTKSPLTDKFYFNGNNSIWQCGQNDNDKVLTQIQTTLMSCRIAHYLKVQVREMV
GSFNSANECELFLTNWIEKFSSNVSFANEETLSKYPLSFAKVSVRESHSQAGSFACTLRIVPQYQFDYFSGEVVLTTDLN
EVAS

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55048; Mature: 55048

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFLVNRDLAGVIRPKFFMKLDTEWQNKFNQLDNTDNTFIKEALSLLSELDQHSLRSKS
CEEEEECCCHHHHHCCHHEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLISLISTLISKIDTALSLQLDAIIQEPDFQKLERNWLSLQQLVSLPISYQRAHVKLLDM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
NWTEISSDVNQAYSTKSSDLYNKIGNSELNTLGGHPFGCITFSHPISMDIDFDANYDDLF
CHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHCCCCCEEEEEECCCEEEEEECCCCCCHHH
TVELLGKLGEATLCPMLFSPVPTFFGENGADWLSDITRINKILSGPDFKAWQDLRSKPSS
HHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
RFIGMALPQVRLRDAYKNRRVGFVYNEQGKGSWGLANMVLATTIMREFHRVNWFGFLKSR
CEEHHCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNDKLQGSVINLPASHYFDSHLQKPVADVSLFGQLSNFYAQSGFIPLTKSPLTDKFYFNG
CCCCCCCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
NNSIWQCGQNDNDKVLTQIQTTLMSCRIAHYLKVQVREMVGSFNSANECELFLTNWIEKF
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SSNVSFANEETLSKYPLSFAKVSVRESHSQAGSFACTLRIVPQYQFDYFSGEVVLTTDLN
CCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCEEEEECHH
EVAS
HHCC
>Mature Secondary Structure
MLRFLVNRDLAGVIRPKFFMKLDTEWQNKFNQLDNTDNTFIKEALSLLSELDQHSLRSKS
CEEEEECCCHHHHHCCHHEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLISLISTLISKIDTALSLQLDAIIQEPDFQKLERNWLSLQQLVSLPISYQRAHVKLLDM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
NWTEISSDVNQAYSTKSSDLYNKIGNSELNTLGGHPFGCITFSHPISMDIDFDANYDDLF
CHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHCCCCCEEEEEECCCEEEEEECCCCCCHHH
TVELLGKLGEATLCPMLFSPVPTFFGENGADWLSDITRINKILSGPDFKAWQDLRSKPSS
HHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
RFIGMALPQVRLRDAYKNRRVGFVYNEQGKGSWGLANMVLATTIMREFHRVNWFGFLKSR
CEEHHCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNDKLQGSVINLPASHYFDSHLQKPVADVSLFGQLSNFYAQSGFIPLTKSPLTDKFYFNG
CCCCCCCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
NNSIWQCGQNDNDKVLTQIQTTLMSCRIAHYLKVQVREMVGSFNSANECELFLTNWIEKF
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
SSNVSFANEETLSKYPLSFAKVSVRESHSQAGSFACTLRIVPQYQFDYFSGEVVLTTDLN
CCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCEEEEECHH
EVAS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA