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The map label for this gene is 218709319

Identifier: 218709319

GI number: 218709319

Start: 1434915

End: 1436666

Strand: Reverse

Name: 218709319

Synonym: VS_1328

Alternate gene names: NA

Gene position: 1436666-1434915 (Counterclockwise)

Preceding gene: 218709320

Following gene: 218709318

Centisome position: 43.54

GC content: 41.21

Gene sequence:

>1752_bases
ATGACTGAACCCATTATGCGTTACTTCGAGCAAGAACTGGCCTTTGTGCGCCGTTCGTTAGGTCAGTTCGGTCAGGAATA
CCCTACTCATGCCGAAAACCTCAATATCCATCAAGGTAAGATCGAAGACCCTAGCATGGCTCGCTTACTCGACGGTGTAG
CACTATTGAACGCAAAGGTCGAAAAGAAACTATCTGAACAGTTGCCTGAAGTTATCGAAGGTATTTTGAGTGTTCTCTAC
CCTTCTTATATTCAAACTGTTCCTAGTGTTGCTTATCTTGAACTTCATACTGAAGACGGTCCTATTGAATCAAGCAGCTT
GCCTAAAGGCTCACTTTTTTCAAGTACAAACACGAAAAACGAGTGCCTATTTAAGACCGTTGACGAACTCAATATAGCAC
CATTTAATTTAAGCAATGCCAGAGCATTGAGTGCGCCGTTTAGTTTCAACAGACCTTCAACAGCTAACCAAAGCTCCGCG
GTTGTTCAGATATCTCTGAGTACTGGTGATCCGGATGTTTATTTCAGCCATTTAGAATTAGGTGATCTCGATTTCTTCGT
CAAAGGCTTCGAAAATAATGCTGACTCTCTCGTCGATTTGCTTCTCAACAATACCTTGTCGATTTCCATTTCCGATTCCG
AGTGTGCCCAACACTCGACCGTTGATAACCTTCAACTAAAAAATCGAATTAGTGATCTCGAGTTTAAGTTCTTGCCTGAA
CACGGAAATCAATTCACCGGTTATCAACTGATCAATGAATTCTTCTTTTTCAAAGAGAAGCGACAGTTCTTTAGACTAAA
AAACTTTGCTGAACACGCGAACAAATTTGACGAGTCTGAAATCGTGATTAATTTGTTTATGTCATCATTGCCATCGGAGT
TCATTCGTCTATTTAATAAAGACGTATTCAAGCTCAATGTCGTGCCTGCGATTAATTTATTTGAGCAAACTGGCGAACCG
ATCCCATATGACCACCGGACTCTATCCGTTCCAGTTAATGCCGACGCTCATAGTGACAACAATATAGAAATCATTGAAAT
TCAAAACGTCTATGAAATCACTCCGAACGGAGAGGTCCCTTTAATTCCACTTTTTAAAGAAAAGTATTCACACAATCAAA
GTTACGACTACTGGCAAAGTAAACACGATCACTTTGGTGAAGTAAGCATAGCGATTTCGTTATCGGACACGACAAATACA
GAATTTAGCAAGCTACTTGGTACCAAGTTACTGTGTACAAATGGGAAGCAAGCTTGTGGTGTAATCGGCACTTTGGAATG
CTTAGAGAGTATTGATTTACCCGGTGATTTCTCACCTATTTACCCGCCGTCTGCGCCGATTAAAAAAGAAATCGACCAAA
ACATCCACTGGGAATTTATTAGCTTATTGAACACCAACTTCACATCATTGGTGCAATCTAGCAACCCGGTAGCTGAACTC
AAACATATGTTGAGTTTGTGCAGTCGCGACCAGGTATCAAGCACAGAAATTCAGATGATTCACTCAATTACATTCAATTC
GCAAGTTTCTGCAATTCGTGTGTTGGGTAAGAACGTGTTCTCGCCCGGAACCGAGATTGAACTTACGCTTGATGCCACCT
CACCTTACCTAGCATTTGCCGATGTGTTGAATCGCTTCTTCCAGCAGTTTTGCAGTTTTGATAGATACATTCAACTTAAG
ATTCGTCTCTATGGGCGAGATGGTTTCATAAAAACATACCCTAAGATTCACGGTAGCCAATTGTGCCTGTAA

Upstream 100 bases:

>100_bases
ATCATAGCTAAAGTGAAGACCAATAATGGTGAACGAGACCTAATCTTTGATTCAAGAATCGCACTAAGCGATTTAACTAC
ATCTATAGAAGAAGATAGCT

Downstream 100 bases:

>100_bases
CTCCACAAAATAAGCACAATTGGATCGATCGTTATAGGAAGCCAATATGAAGCATTTCATCGAAGATCTAACGACTCAAC
CCGAAAAGTACGACTTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: T6ss C; Type VI Secretion Protein Family; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion System; Type VI Secretion; Type VI Secretion System Core Protein; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MTEPIMRYFEQELAFVRRSLGQFGQEYPTHAENLNIHQGKIEDPSMARLLDGVALLNAKVEKKLSEQLPEVIEGILSVLY
PSYIQTVPSVAYLELHTEDGPIESSSLPKGSLFSSTNTKNECLFKTVDELNIAPFNLSNARALSAPFSFNRPSTANQSSA
VVQISLSTGDPDVYFSHLELGDLDFFVKGFENNADSLVDLLLNNTLSISISDSECAQHSTVDNLQLKNRISDLEFKFLPE
HGNQFTGYQLINEFFFFKEKRQFFRLKNFAEHANKFDESEIVINLFMSSLPSEFIRLFNKDVFKLNVVPAINLFEQTGEP
IPYDHRTLSVPVNADAHSDNNIEIIEIQNVYEITPNGEVPLIPLFKEKYSHNQSYDYWQSKHDHFGEVSIAISLSDTTNT
EFSKLLGTKLLCTNGKQACGVIGTLECLESIDLPGDFSPIYPPSAPIKKEIDQNIHWEFISLLNTNFTSLVQSSNPVAEL
KHMLSLCSRDQVSSTEIQMIHSITFNSQVSAIRVLGKNVFSPGTEIELTLDATSPYLAFADVLNRFFQQFCSFDRYIQLK
IRLYGRDGFIKTYPKIHGSQLCL

Sequences:

>Translated_583_residues
MTEPIMRYFEQELAFVRRSLGQFGQEYPTHAENLNIHQGKIEDPSMARLLDGVALLNAKVEKKLSEQLPEVIEGILSVLY
PSYIQTVPSVAYLELHTEDGPIESSSLPKGSLFSSTNTKNECLFKTVDELNIAPFNLSNARALSAPFSFNRPSTANQSSA
VVQISLSTGDPDVYFSHLELGDLDFFVKGFENNADSLVDLLLNNTLSISISDSECAQHSTVDNLQLKNRISDLEFKFLPE
HGNQFTGYQLINEFFFFKEKRQFFRLKNFAEHANKFDESEIVINLFMSSLPSEFIRLFNKDVFKLNVVPAINLFEQTGEP
IPYDHRTLSVPVNADAHSDNNIEIIEIQNVYEITPNGEVPLIPLFKEKYSHNQSYDYWQSKHDHFGEVSIAISLSDTTNT
EFSKLLGTKLLCTNGKQACGVIGTLECLESIDLPGDFSPIYPPSAPIKKEIDQNIHWEFISLLNTNFTSLVQSSNPVAEL
KHMLSLCSRDQVSSTEIQMIHSITFNSQVSAIRVLGKNVFSPGTEIELTLDATSPYLAFADVLNRFFQQFCSFDRYIQLK
IRLYGRDGFIKTYPKIHGSQLCL
>Mature_582_residues
TEPIMRYFEQELAFVRRSLGQFGQEYPTHAENLNIHQGKIEDPSMARLLDGVALLNAKVEKKLSEQLPEVIEGILSVLYP
SYIQTVPSVAYLELHTEDGPIESSSLPKGSLFSSTNTKNECLFKTVDELNIAPFNLSNARALSAPFSFNRPSTANQSSAV
VQISLSTGDPDVYFSHLELGDLDFFVKGFENNADSLVDLLLNNTLSISISDSECAQHSTVDNLQLKNRISDLEFKFLPEH
GNQFTGYQLINEFFFFKEKRQFFRLKNFAEHANKFDESEIVINLFMSSLPSEFIRLFNKDVFKLNVVPAINLFEQTGEPI
PYDHRTLSVPVNADAHSDNNIEIIEIQNVYEITPNGEVPLIPLFKEKYSHNQSYDYWQSKHDHFGEVSIAISLSDTTNTE
FSKLLGTKLLCTNGKQACGVIGTLECLESIDLPGDFSPIYPPSAPIKKEIDQNIHWEFISLLNTNFTSLVQSSNPVAELK
HMLSLCSRDQVSSTEIQMIHSITFNSQVSAIRVLGKNVFSPGTEIELTLDATSPYLAFADVLNRFFQQFCSFDRYIQLKI
RLYGRDGFIKTYPKIHGSQLCL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65834; Mature: 65703

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPIMRYFEQELAFVRRSLGQFGQEYPTHAENLNIHQGKIEDPSMARLLDGVALLNAKV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EKKLSEQLPEVIEGILSVLYPSYIQTVPSVAYLELHTEDGPIESSSLPKGSLFSSTNTKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ECLFKTVDELNIAPFNLSNARALSAPFSFNRPSTANQSSAVVQISLSTGDPDVYFSHLEL
HHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEE
GDLDFFVKGFENNADSLVDLLLNNTLSISISDSECAQHSTVDNLQLKNRISDLEFKFLPE
CCHHHEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEEECC
HGNQFTGYQLINEFFFFKEKRQFFRLKNFAEHANKFDESEIVINLFMSSLPSEFIRLFNK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
DVFKLNVVPAINLFEQTGEPIPYDHRTLSVPVNADAHSDNNIEIIEIQNVYEITPNGEVP
CEEEEEECCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCEEEECCCCCCC
LIPLFKEKYSHNQSYDYWQSKHDHFGEVSIAISLSDTTNTEFSKLLGTKLLCTNGKQACG
EEEHHHHHCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCCHHH
VIGTLECLESIDLPGDFSPIYPPSAPIKKEIDQNIHWEFISLLNTNFTSLVQSSNPVAEL
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCHHHH
KHMLSLCSRDQVSSTEIQMIHSITFNSQVSAIRVLGKNVFSPGTEIELTLDATSPYLAFA
HHHHHHHCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHH
DVLNRFFQQFCSFDRYIQLKIRLYGRDGFIKTYPKIHGSQLCL
HHHHHHHHHHHCCCCEEEEEEEEECCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
TEPIMRYFEQELAFVRRSLGQFGQEYPTHAENLNIHQGKIEDPSMARLLDGVALLNAKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EKKLSEQLPEVIEGILSVLYPSYIQTVPSVAYLELHTEDGPIESSSLPKGSLFSSTNTKN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ECLFKTVDELNIAPFNLSNARALSAPFSFNRPSTANQSSAVVQISLSTGDPDVYFSHLEL
HHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEE
GDLDFFVKGFENNADSLVDLLLNNTLSISISDSECAQHSTVDNLQLKNRISDLEFKFLPE
CCHHHEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEEECC
HGNQFTGYQLINEFFFFKEKRQFFRLKNFAEHANKFDESEIVINLFMSSLPSEFIRLFNK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
DVFKLNVVPAINLFEQTGEPIPYDHRTLSVPVNADAHSDNNIEIIEIQNVYEITPNGEVP
CEEEEEECCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCEEEECCCCCCC
LIPLFKEKYSHNQSYDYWQSKHDHFGEVSIAISLSDTTNTEFSKLLGTKLLCTNGKQACG
EEEHHHHHCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCCHHH
VIGTLECLESIDLPGDFSPIYPPSAPIKKEIDQNIHWEFISLLNTNFTSLVQSSNPVAEL
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCHHHH
KHMLSLCSRDQVSSTEIQMIHSITFNSQVSAIRVLGKNVFSPGTEIELTLDATSPYLAFA
HHHHHHHCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHH
DVLNRFFQQFCSFDRYIQLKIRLYGRDGFIKTYPKIHGSQLCL
HHHHHHHHHHHCCCCEEEEEEEEECCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA