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The map label for this gene is 218709313

Identifier: 218709313

GI number: 218709313

Start: 1425978

End: 1426928

Strand: Reverse

Name: 218709313

Synonym: VS_1322

Alternate gene names: NA

Gene position: 1426928-1425978 (Counterclockwise)

Preceding gene: 218709314

Following gene: 218709312

Centisome position: 43.25

GC content: 41.64

Gene sequence:

>951_bases
TTGTCTATCAGTGTCCACATGATTTCTATACCTGCTGAAGAGGTCGTTACCTCTAGAGTCGTTTACCTGCCTGAAAATGG
CGGAAGCTTAGGTCGTTCGCCATCATGTGATATTGCGCTACCTGACCAAACCAAATGGGTCTCAAGAACTCACTGCCAGA
TCTACCCCACTGAACGCGGGTACGCCATCAAAGACGTTAGTAACAATGGTGCTACGTTAAACGATAAATCATTGATAAGA
GAGAAAGAATACATACTTTCCGATGGCGATATTATAAAATTAGGTCACTACACACTGTTAGTTAGCCTGTTAAGCGCACC
TAAAGTGGATGCTACGAATAACACCAATCAGGATGATCTTTTTATAGAACCTTTCAACTTAAAGCTTGACGACAATGACA
CAGACTTTTTGGATACTACGCCTGAAGTGACGATAGTTAAGAAAGCCTCAAACTTTTCTTCAACGAATGTTCTGAGTGAC
GACCCGTTCTCGTCAGACCCCTTTGAAGATTTAGATAGCGATAAAGTCGTTCCCAACATTGAAGTAGACGAAGTCGTTCA
CAACAGAGGAGGCTCCCTGCCCTCTGCTGAGTTGGAATATTTTCCTGTCAATGCCGAGAACAACACACGAATTGAAGAGT
CGATAGACAAGCTCATCACACTGACGGAAAAAAATCAACAATACTTACAGAACCCACAGCTACAACAAAAAGCTCTTTTT
GAGGCATTGGAACAAACGGTAGACCAGTTTCTAAACGAATTTGCACCAAAGCAACTTGAAAACCAGTTTAGCGAATACGT
GAGTGACGGCATTTTTTCCAACAAGGATAAAAAATATTGGAAGATCTATCGAAAGCACTTCCAACACCGTCAAGACAATG
GGGACTTCAGACGTCAGTTCAAAGCATTATTTATGGAAAATATGCAAAAGCAAAGTGAGAGGCAAGAATGA

Upstream 100 bases:

>100_bases
CAAAAATATGGGGGTCTACTTTTCAAATCGATTCCTTAAAACCTATTCCGGGTTTTTAGATAGTTTTAACTCAGCTATAT
CCAAGTGCAAGGAGTAACCA

Downstream 100 bases:

>100_bases
AACGTTTAATGCTATTGTCTCTTTGTTTAATGATAACGGCGTGCTCATCGTCAGACCCCGCCCCTGTTGTCACCCAATAC
TCACTGACAGTTAAAGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion; Protein ImpI/VasC

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSISVHMISIPAEEVVTSRVVYLPENGGSLGRSPSCDIALPDQTKWVSRTHCQIYPTERGYAIKDVSNNGATLNDKSLIR
EKEYILSDGDIIKLGHYTLLVSLLSAPKVDATNNTNQDDLFIEPFNLKLDDNDTDFLDTTPEVTIVKKASNFSSTNVLSD
DPFSSDPFEDLDSDKVVPNIEVDEVVHNRGGSLPSAELEYFPVNAENNTRIEESIDKLITLTEKNQQYLQNPQLQQKALF
EALEQTVDQFLNEFAPKQLENQFSEYVSDGIFSNKDKKYWKIYRKHFQHRQDNGDFRRQFKALFMENMQKQSERQE

Sequences:

>Translated_316_residues
MSISVHMISIPAEEVVTSRVVYLPENGGSLGRSPSCDIALPDQTKWVSRTHCQIYPTERGYAIKDVSNNGATLNDKSLIR
EKEYILSDGDIIKLGHYTLLVSLLSAPKVDATNNTNQDDLFIEPFNLKLDDNDTDFLDTTPEVTIVKKASNFSSTNVLSD
DPFSSDPFEDLDSDKVVPNIEVDEVVHNRGGSLPSAELEYFPVNAENNTRIEESIDKLITLTEKNQQYLQNPQLQQKALF
EALEQTVDQFLNEFAPKQLENQFSEYVSDGIFSNKDKKYWKIYRKHFQHRQDNGDFRRQFKALFMENMQKQSERQE
>Mature_315_residues
SISVHMISIPAEEVVTSRVVYLPENGGSLGRSPSCDIALPDQTKWVSRTHCQIYPTERGYAIKDVSNNGATLNDKSLIRE
KEYILSDGDIIKLGHYTLLVSLLSAPKVDATNNTNQDDLFIEPFNLKLDDNDTDFLDTTPEVTIVKKASNFSSTNVLSDD
PFSSDPFEDLDSDKVVPNIEVDEVVHNRGGSLPSAELEYFPVNAENNTRIEESIDKLITLTEKNQQYLQNPQLQQKALFE
ALEQTVDQFLNEFAPKQLENQFSEYVSDGIFSNKDKKYWKIYRKHFQHRQDNGDFRRQFKALFMENMQKQSERQE

Specific function: Unknown

COG id: COG3456

COG function: function code T; Uncharacterized conserved protein, contains FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36158; Mature: 36026

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISVHMISIPAEEVVTSRVVYLPENGGSLGRSPSCDIALPDQTKWVSRTHCQIYPTERG
CCEEEEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCEECCCCCCHHCCCCEEEEECCCC
YAIKDVSNNGATLNDKSLIREKEYILSDGDIIKLGHYTLLVSLLSAPKVDATNNTNQDDL
EEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCE
FIEPFNLKLDDNDTDFLDTTPEVTIVKKASNFSSTNVLSDDPFSSDPFEDLDSDKVVPNI
EEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
EVDEVVHNRGGSLPSAELEYFPVNAENNTRIEESIDKLITLTEKNQQYLQNPQLQQKALF
CHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH
EALEQTVDQFLNEFAPKQLENQFSEYVSDGIFSNKDKKYWKIYRKHFQHRQDNGDFRRQF
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
KALFMENMQKQSERQE
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISVHMISIPAEEVVTSRVVYLPENGGSLGRSPSCDIALPDQTKWVSRTHCQIYPTERG
CEEEEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCEECCCCCCHHCCCCEEEEECCCC
YAIKDVSNNGATLNDKSLIREKEYILSDGDIIKLGHYTLLVSLLSAPKVDATNNTNQDDL
EEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCE
FIEPFNLKLDDNDTDFLDTTPEVTIVKKASNFSSTNVLSDDPFSSDPFEDLDSDKVVPNI
EEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
EVDEVVHNRGGSLPSAELEYFPVNAENNTRIEESIDKLITLTEKNQQYLQNPQLQQKALF
CHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH
EALEQTVDQFLNEFAPKQLENQFSEYVSDGIFSNKDKKYWKIYRKHFQHRQDNGDFRRQF
HHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
KALFMENMQKQSERQE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA