Click here to switch to the map view.

The map label for this gene is 218709308

Identifier: 218709308

GI number: 218709308

Start: 1418722

End: 1419408

Strand: Reverse

Name: 218709308

Synonym: VS_1317

Alternate gene names: NA

Gene position: 1419408-1418722 (Counterclockwise)

Preceding gene: 218709309

Following gene: 218709307

Centisome position: 43.02

GC content: 42.65

Gene sequence:

>687_bases
TTGAAGGGAGAATTTTCGGACGACGCAAAGCTCAAGCAGGAGCTAACTAACCGTGGCTACACTAATCTCTCTCGATTAGG
TAGACGTGTACTTCAAGCCCAGCACCCTAGCTGGGGCGTCGTTACTATAAAGTATGCTCAAGCAGTAAAGCACCGTCACT
TTCTCAAACAAGAGGCTGAGTTTCTCTATTCCAACTCCAATTATAACTGGCCAGAATATTGCGATTATTTCTCTAACCAG
CAGAGTGACTATCTAGTCCTTTCCCACATTAGTGGAATAACACTATTGCAAATCCAAACCGAGCCTTCTAAGTCAAACAA
CCTCCCTGCCAACTGGATTACCTTGCTAGAGCGCTCGATTCATCAAGTCCACAAACTTGGTTTCGTTCATGGTGACATTA
AACCATCTAACATCGTATTGACTCCTCAAGGGCAAGTGCATTTAATTGACTTCGGCTCTGTCATAAAGAACAGAACTCTG
CGTTCCGAGCTACGTTTTGAAAGCTATACACCAAGGTATTCAACACCTAGTTCAGTCTTAGGCAAATTCGATGACTGGTT
TGCTCTTGCTGTGATACTAGAAGAGTACTTTGACCAATTTGATAACAAAAGTAGCTCAAAACAGTCCTTCCAATACATAA
GTCTACCTAGCAGGTATCACATACTGTTAAGGAAATGTAGGAGCTAG

Upstream 100 bases:

>100_bases
GTAGCTCGCTTTGTACATCAAAGCGAGCTCCATCTTATGACAATAATTCTCTGTCAATAAGTTGCTCTTCCTTTGGTTTT
AACACTCTGGCAAAGTTGCT

Downstream 100 bases:

>100_bases
AATAGTATGAGCCCTAGACTACACCATAGATAAAGTTATTCTTTGTTATGCAATGGTTAATCATGTAAAATGACCATTCA
CATCGCATATAGAATTACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKGEFSDDAKLKQELTNRGYTNLSRLGRRVLQAQHPSWGVVTIKYAQAVKHRHFLKQEAEFLYSNSNYNWPEYCDYFSNQ
QSDYLVLSHISGITLLQIQTEPSKSNNLPANWITLLERSIHQVHKLGFVHGDIKPSNIVLTPQGQVHLIDFGSVIKNRTL
RSELRFESYTPRYSTPSSVLGKFDDWFALAVILEEYFDQFDNKSSSKQSFQYISLPSRYHILLRKCRS

Sequences:

>Translated_228_residues
MKGEFSDDAKLKQELTNRGYTNLSRLGRRVLQAQHPSWGVVTIKYAQAVKHRHFLKQEAEFLYSNSNYNWPEYCDYFSNQ
QSDYLVLSHISGITLLQIQTEPSKSNNLPANWITLLERSIHQVHKLGFVHGDIKPSNIVLTPQGQVHLIDFGSVIKNRTL
RSELRFESYTPRYSTPSSVLGKFDDWFALAVILEEYFDQFDNKSSSKQSFQYISLPSRYHILLRKCRS
>Mature_228_residues
MKGEFSDDAKLKQELTNRGYTNLSRLGRRVLQAQHPSWGVVTIKYAQAVKHRHFLKQEAEFLYSNSNYNWPEYCDYFSNQ
QSDYLVLSHISGITLLQIQTEPSKSNNLPANWITLLERSIHQVHKLGFVHGDIKPSNIVLTPQGQVHLIDFGSVIKNRTL
RSELRFESYTPRYSTPSSVLGKFDDWFALAVILEEYFDQFDNKSSSKQSFQYISLPSRYHILLRKCRS

Specific function: Unknown

COG id: COG0515

COG function: function code RTKL; Serine/threonine protein kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26524; Mature: 26524

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGEFSDDAKLKQELTNRGYTNLSRLGRRVLQAQHPSWGVVTIKYAQAVKHRHFLKQEAE
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
FLYSNSNYNWPEYCDYFSNQQSDYLVLSHISGITLLQIQTEPSKSNNLPANWITLLERSI
HHCCCCCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
HQVHKLGFVHGDIKPSNIVLTPQGQVHLIDFGSVIKNRTLRSELRFESYTPRYSTPSSVL
HHHHHHHHHCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GKFDDWFALAVILEEYFDQFDNKSSSKQSFQYISLPSRYHILLRKCRS
HCHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MKGEFSDDAKLKQELTNRGYTNLSRLGRRVLQAQHPSWGVVTIKYAQAVKHRHFLKQEAE
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
FLYSNSNYNWPEYCDYFSNQQSDYLVLSHISGITLLQIQTEPSKSNNLPANWITLLERSI
HHCCCCCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
HQVHKLGFVHGDIKPSNIVLTPQGQVHLIDFGSVIKNRTLRSELRFESYTPRYSTPSSVL
HHHHHHHHHCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
GKFDDWFALAVILEEYFDQFDNKSSSKQSFQYISLPSRYHILLRKCRS
HCHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA