| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709292
Identifier: 218709292
GI number: 218709292
Start: 1399084
End: 1399311
Strand: Reverse
Name: 218709292
Synonym: VS_1301
Alternate gene names: NA
Gene position: 1399311-1399084 (Counterclockwise)
Preceding gene: 218709298
Following gene: 218709291
Centisome position: 42.41
GC content: 40.35
Gene sequence:
>228_bases ATGAAACGCGATAACTTTGGAATTTGTCTTACTAAGACTATGCTGTTCAAACACTTACAATCGACTTTTACTCACGTAAG AGCCTATGAGAAAGACGGAACCTCTCCTCTTGATCTCAAGGTATTGTTAGCGTTCCCGCAAATGTCAGGTAGAGATTTAT TACAAACAATGCAAGGTTCAAGACAATTGGTGTGGCGCGCCGATCACCATTGTCCTAGCTTTAAATAA
Upstream 100 bases:
>100_bases TAAAACATTGATGAGCAGGAAGTATCGATCAGTGGCAACGTCCAATAGAAACAGGATAAAAAACATAACGTATAAACATT GTTGAAAAGGAAACCAGGCA
Downstream 100 bases:
>100_bases GCCACTTCATTTTGTAAAAACACTTCTATACTGAACTTAAAGAGCACGCTTTGTCGTGCTCTTTTCGTTTCAGTGATCTT TGTTGCCCACATCACGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MKRDNFGICLTKTMLFKHLQSTFTHVRAYEKDGTSPLDLKVLLAFPQMSGRDLLQTMQGSRQLVWRADHHCPSFK
Sequences:
>Translated_75_residues MKRDNFGICLTKTMLFKHLQSTFTHVRAYEKDGTSPLDLKVLLAFPQMSGRDLLQTMQGSRQLVWRADHHCPSFK >Mature_75_residues MKRDNFGICLTKTMLFKHLQSTFTHVRAYEKDGTSPLDLKVLLAFPQMSGRDLLQTMQGSRQLVWRADHHCPSFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8709; Mature: 8709
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDNFGICLTKTMLFKHLQSTFTHVRAYEKDGTSPLDLKVLLAFPQMSGRDLLQTMQGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCC RQLVWRADHHCPSFK CEEEEECCCCCCCCC >Mature Secondary Structure MKRDNFGICLTKTMLFKHLQSTFTHVRAYEKDGTSPLDLKVLLAFPQMSGRDLLQTMQGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCC RQLVWRADHHCPSFK CEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA