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The map label for this gene is 218709291

Identifier: 218709291

GI number: 218709291

Start: 1397416

End: 1398870

Strand: Reverse

Name: 218709291

Synonym: VS_1300

Alternate gene names: NA

Gene position: 1398870-1397416 (Counterclockwise)

Preceding gene: 218709292

Following gene: 218709290

Centisome position: 42.4

GC content: 45.02

Gene sequence:

>1455_bases
ATGCAGATGACCAAACCAAAATTCCGACACCTTGCGCTCGCCAGTATGCTTCTCGGCACATTTGCTTCGCCAGTTTTCTC
TGCCCCGCTCACTTTTTCTGAAGCGTGGCAAATATTGCAAGAGAACAACAACTCACTTGCAGCTCAACAAGCTAACGTCG
AGCGTTATCAACACCTTCAGAATTCAACAAGCAGCCTTAATCTACCTTCGATCACCTTGGGGGCTAACTACACGCACCTT
GATAGTGATGTGACAATTAATGGTGAACAGTTCAAAAATAGCTTAAGCGGCGTGCCAAATTTAGGTGCAGTTGGAGGTAT
TCTCCAGCCTATATTAAGTGGGCTTGGCGGTGTTACCTCAACCATCACCGAACAAGACATCTTCAGCTCTTCCATCCGTG
CTATTTGGCCTATCTTTACTGGCGGACGAATTACCGCTGCGCAAACTGCTGCCGAAGGTAAAAGCGAAGAAGCGCAAAGC
CAACTGCTGATGGAGAAACAGGCTCGCTACGAAGACTTAAGTAAATATTACTTCTCGGTGATCTTAGCGGAAGACGTCGT
GAGAACACGTCAAGCCGTTGAAGCTGGCTTAACTCAGCATCGTGATTTCGCCATCAAGCTTGAACAGCAAGGACAAATTG
CTCGAGTAGAACGTCTGCAGGCGGATGCTTCTTTGGATAAAGCCGTTGTTGAACGAACCAAAGCGCAGAACGACCTCAAA
ATTGCTCAATTAGCACTGACTCAGATCCTTGGTCAGAGCCAAAGTGTCGAACCTTCAGAACAACTCTTTATCAACAAAAA
CCTGCCTCATATGGACGTATTTGTTGATCAAACCCTCATGACCTACCCAGGCCTTAAAATCCTTGAAGCAAAAGAGAAAC
AAGCGAGTAGCTTGATCAAGGCTGAAAAAGGCAAATACTACCCAGAAGTTTACCTTTACGGTGATTACAGCCTGTACGAA
GATGACTCGCTAGCCAGTGAAATGAAACCCGATTGGTTAGTCGGTATTGGTGTAAATGTACCGCTACTTGACACGTCAGG
TCGTTCCGACAAAGTCGCTGCCGCTCATAGCGCCGTGTCTCAAGTCCAGTTTCTTAAGTCACAAGCCAAGCAAGACTTAA
CCGTTTTGGTACAAAAGACCTATCTTGAAGCGAACCAAGCAATTGAAGAAGTTCAAGGCCTCAACTCAAGTCTGTCTTTA
GCTCAAGAAAACCTTTCACTTCGTAAAAAAGCCTTCACTCAAGGGTTATCCAATTCGTTAGAAGTGGTTGATGCTGAGCT
TTATCTTGCAAGCATTAAAACACAGCAATCTGCTGCTCGATTCAAATACCTAATTTCTCTTAATAAGCTGTTAGCACTCA
CCAGTGAAATGAATGCTTATTCAAGTTACTTAACGTCTTCTGTCCCGTCTGACTTCGATTCAAAAGCAGACACCGCTAGC
CAGTCAAAAGGATAA

Upstream 100 bases:

>100_bases
TTAACGAGTTATGAGCGTTTATAATCCTGTGAGACAATCATCTCAAGACAAATGACTATCACCCTGTTAGCATTAGAGCT
AATACTCTAAATGGTATTTA

Downstream 100 bases:

>100_bases
TTCATGAAACCTATTAAGCCATTTATTCTCTCTCTGGTTGGTATCGGCATTATTGGCTGGGTTGGATACAGCTTTTACCA
AGCGTACCAACCACAGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Macrolide Efflux Protein; Outer Membrane Efflux Family Protein; RND Family Drug Transporter; Outer Membrane Efflux Protein Domain Protein; Outer Membrane Protein-Like; Type I Secretion Outer Membrane Protein

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MQMTKPKFRHLALASMLLGTFASPVFSAPLTFSEAWQILQENNNSLAAQQANVERYQHLQNSTSSLNLPSITLGANYTHL
DSDVTINGEQFKNSLSGVPNLGAVGGILQPILSGLGGVTSTITEQDIFSSSIRAIWPIFTGGRITAAQTAAEGKSEEAQS
QLLMEKQARYEDLSKYYFSVILAEDVVRTRQAVEAGLTQHRDFAIKLEQQGQIARVERLQADASLDKAVVERTKAQNDLK
IAQLALTQILGQSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILEAKEKQASSLIKAEKGKYYPEVYLYGDYSLYE
DDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVSQVQFLKSQAKQDLTVLVQKTYLEANQAIEEVQGLNSSLSL
AQENLSLRKKAFTQGLSNSLEVVDAELYLASIKTQQSAARFKYLISLNKLLALTSEMNAYSSYLTSSVPSDFDSKADTAS
QSKG

Sequences:

>Translated_484_residues
MQMTKPKFRHLALASMLLGTFASPVFSAPLTFSEAWQILQENNNSLAAQQANVERYQHLQNSTSSLNLPSITLGANYTHL
DSDVTINGEQFKNSLSGVPNLGAVGGILQPILSGLGGVTSTITEQDIFSSSIRAIWPIFTGGRITAAQTAAEGKSEEAQS
QLLMEKQARYEDLSKYYFSVILAEDVVRTRQAVEAGLTQHRDFAIKLEQQGQIARVERLQADASLDKAVVERTKAQNDLK
IAQLALTQILGQSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILEAKEKQASSLIKAEKGKYYPEVYLYGDYSLYE
DDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVSQVQFLKSQAKQDLTVLVQKTYLEANQAIEEVQGLNSSLSL
AQENLSLRKKAFTQGLSNSLEVVDAELYLASIKTQQSAARFKYLISLNKLLALTSEMNAYSSYLTSSVPSDFDSKADTAS
QSKG
>Mature_484_residues
MQMTKPKFRHLALASMLLGTFASPVFSAPLTFSEAWQILQENNNSLAAQQANVERYQHLQNSTSSLNLPSITLGANYTHL
DSDVTINGEQFKNSLSGVPNLGAVGGILQPILSGLGGVTSTITEQDIFSSSIRAIWPIFTGGRITAAQTAAEGKSEEAQS
QLLMEKQARYEDLSKYYFSVILAEDVVRTRQAVEAGLTQHRDFAIKLEQQGQIARVERLQADASLDKAVVERTKAQNDLK
IAQLALTQILGQSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILEAKEKQASSLIKAEKGKYYPEVYLYGDYSLYE
DDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVSQVQFLKSQAKQDLTVLVQKTYLEANQAIEEVQGLNSSLSL
AQENLSLRKKAFTQGLSNSLEVVDAELYLASIKTQQSAARFKYLISLNKLLALTSEMNAYSSYLTSSVPSDFDSKADTAS
QSKG

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53028; Mature: 53028

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMTKPKFRHLALASMLLGTFASPVFSAPLTFSEAWQILQENNNSLAAQQANVERYQHLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NSTSSLNLPSITLGANYTHLDSDVTINGEQFKNSLSGVPNLGAVGGILQPILSGLGGVTS
CCCCCCCCCEEEECCCEEECCCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
TITEQDIFSSSIRAIWPIFTGGRITAAQTAAEGKSEEAQSQLLMEKQARYEDLSKYYFSV
HHHHHHHHHHHHHHHHHEECCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILAEDVVRTRQAVEAGLTQHRDFAIKLEQQGQIARVERLQADASLDKAVVERTKAQNDLK
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IAQLALTQILGQSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILEAKEKQASSLIK
HHHHHHHHHHCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
AEKGKYYPEVYLYGDYSLYEDDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVS
HHCCCCCCEEEEEECCCCCCCCHHHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHH
QVQFLKSQAKQDLTVLVQKTYLEANQAIEEVQGLNSSLSLAQENLSLRKKAFTQGLSNSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
EVVDAELYLASIKTQQSAARFKYLISLNKLLALTSEMNAYSSYLTSSVPSDFDSKADTAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QSKG
CCCC
>Mature Secondary Structure
MQMTKPKFRHLALASMLLGTFASPVFSAPLTFSEAWQILQENNNSLAAQQANVERYQHLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NSTSSLNLPSITLGANYTHLDSDVTINGEQFKNSLSGVPNLGAVGGILQPILSGLGGVTS
CCCCCCCCCEEEECCCEEECCCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
TITEQDIFSSSIRAIWPIFTGGRITAAQTAAEGKSEEAQSQLLMEKQARYEDLSKYYFSV
HHHHHHHHHHHHHHHHHEECCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILAEDVVRTRQAVEAGLTQHRDFAIKLEQQGQIARVERLQADASLDKAVVERTKAQNDLK
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IAQLALTQILGQSQSVEPSEQLFINKNLPHMDVFVDQTLMTYPGLKILEAKEKQASSLIK
HHHHHHHHHHCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
AEKGKYYPEVYLYGDYSLYEDDSLASEMKPDWLVGIGVNVPLLDTSGRSDKVAAAHSAVS
HHCCCCCCEEEEEECCCCCCCCHHHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHH
QVQFLKSQAKQDLTVLVQKTYLEANQAIEEVQGLNSSLSLAQENLSLRKKAFTQGLSNSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
EVVDAELYLASIKTQQSAARFKYLISLNKLLALTSEMNAYSSYLTSSVPSDFDSKADTAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QSKG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA