Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218709276

Identifier: 218709276

GI number: 218709276

Start: 1379982

End: 1380977

Strand: Reverse

Name: 218709276

Synonym: VS_1283

Alternate gene names: NA

Gene position: 1380977-1379982 (Counterclockwise)

Preceding gene: 218709282

Following gene: 218709275

Centisome position: 41.86

GC content: 40.96

Gene sequence:

>996_bases
TTGGGATATCAGAACAACATGAATACAGAATTTAATTTTACAATTAAGAGCATTAGCCTCGACGAGAACTATCAACCTGC
GGACAGCACACGTATCACCACCAACTTCGCTAACTTGGCGCGTGGTGACAGCCGCCAAGCAAACTTGCGCAATGCACTGC
AGATGATTGACAACAGTTTCAACGCATTAGCACACTGGGACAACCCAAAGGGCGACCGTTACTCTGTAGAGCTTGAAATC
ATTTCTGTTGATATGGACATTGAAAGCAACGGCGAAGCATTCCCTTCCATTGAAGTACTGAAAACCAATATTCTAGACCG
TAAAACCAACGAGCGTATTGAAGGCATTATCGGAAATAACTTCTCTTCTTATGTTCGAGATTATGACTTTAGCGTACGTC
TATTGGATCATAATAAAGGCCAAGAGAAATTCAGCATTCCAGAAGATTTTGGGGATTTACACGGCAAGCTTTTTAAATAT
TTCGTTAACTCTGACGCTTACAAAAAGAACTTTAATAAACCACCTGTTATTTGCTTAAGCGTGTCAGATAATAAAACCTA
TTACCGAACCGAGAACCAACATCCAGTATTAGGTTTTGAATACCAACCGAATGAGTCTTCTTTAACTGAACAATATTTTA
AGAAGATGGGGTTACAGGTTCGTTACTTCATGCCGCCAAACAGTGTTGCACCTCTAGCTTTCTATTTCTTTGGTGATCTA
CTGAACGATTACTCAAACCTAGAGCTTATCAGCACCATCAGCACCATGGGTACATTCCAAAAAATCTACCGTCCTGAGAT
TTACAACGCGAATGCGGTTGCAGGTAACTGCTACCAACCAAACTTGAAAAACTTGGATCACTCGCTAACTCAAATCGTGT
ATGACCGAGAAGAACGAAGCAAATTAGCTATCGAACAAGGTAAATTCGCAGAAGAGACTTTCATTAAGCCATACCAGTCA
GTTCTAGAGAACTGGTCTGCCAACTACGCGCTTTAA

Upstream 100 bases:

>100_bases
ATTAATTTTTTCATACAGTATTGCCTTCAACTATTAATCCGGTCACAAGCAAAAATAAATGCAATTTTAATTCTAAAGAC
CGAGAAAGTCAGACTACAGA

Downstream 100 bases:

>100_bases
TCGAGCAATTGCGCTCTTAAATCACCAAGGATAGGCAGTATACGTTATGAAAACATTATTACCGACTTCAACAGCAGGCA
GCTTACCTAAGCCATCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MGYQNNMNTEFNFTIKSISLDENYQPADSTRITTNFANLARGDSRQANLRNALQMIDNSFNALAHWDNPKGDRYSVELEI
ISVDMDIESNGEAFPSIEVLKTNILDRKTNERIEGIIGNNFSSYVRDYDFSVRLLDHNKGQEKFSIPEDFGDLHGKLFKY
FVNSDAYKKNFNKPPVICLSVSDNKTYYRTENQHPVLGFEYQPNESSLTEQYFKKMGLQVRYFMPPNSVAPLAFYFFGDL
LNDYSNLELISTISTMGTFQKIYRPEIYNANAVAGNCYQPNLKNLDHSLTQIVYDREERSKLAIEQGKFAEETFIKPYQS
VLENWSANYAL

Sequences:

>Translated_331_residues
MGYQNNMNTEFNFTIKSISLDENYQPADSTRITTNFANLARGDSRQANLRNALQMIDNSFNALAHWDNPKGDRYSVELEI
ISVDMDIESNGEAFPSIEVLKTNILDRKTNERIEGIIGNNFSSYVRDYDFSVRLLDHNKGQEKFSIPEDFGDLHGKLFKY
FVNSDAYKKNFNKPPVICLSVSDNKTYYRTENQHPVLGFEYQPNESSLTEQYFKKMGLQVRYFMPPNSVAPLAFYFFGDL
LNDYSNLELISTISTMGTFQKIYRPEIYNANAVAGNCYQPNLKNLDHSLTQIVYDREERSKLAIEQGKFAEETFIKPYQS
VLENWSANYAL
>Mature_330_residues
GYQNNMNTEFNFTIKSISLDENYQPADSTRITTNFANLARGDSRQANLRNALQMIDNSFNALAHWDNPKGDRYSVELEII
SVDMDIESNGEAFPSIEVLKTNILDRKTNERIEGIIGNNFSSYVRDYDFSVRLLDHNKGQEKFSIPEDFGDLHGKLFKYF
VNSDAYKKNFNKPPVICLSVSDNKTYYRTENQHPVLGFEYQPNESSLTEQYFKKMGLQVRYFMPPNSVAPLAFYFFGDLL
NDYSNLELISTISTMGTFQKIYRPEIYNANAVAGNCYQPNLKNLDHSLTQIVYDREERSKLAIEQGKFAEETFIKPYQSV
LENWSANYAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38217; Mature: 38086

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYQNNMNTEFNFTIKSISLDENYQPADSTRITTNFANLARGDSRQANLRNALQMIDNSF
CCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHCCC
NALAHWDNPKGDRYSVELEIISVDMDIESNGEAFPSIEVLKTNILDRKTNERIEGIIGNN
CEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEECCC
FSSYVRDYDFSVRLLDHNKGQEKFSIPEDFGDLHGKLFKYFVNSDAYKKNFNKPPVICLS
HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEE
VSDNKTYYRTENQHPVLGFEYQPNESSLTEQYFKKMGLQVRYFMPPNSVAPLAFYFFGDL
ECCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
LNDYSNLELISTISTMGTFQKIYRPEIYNANAVAGNCYQPNLKNLDHSLTQIVYDREERS
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHH
KLAIEQGKFAEETFIKPYQSVLENWSANYAL
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GYQNNMNTEFNFTIKSISLDENYQPADSTRITTNFANLARGDSRQANLRNALQMIDNSF
CCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHCCC
NALAHWDNPKGDRYSVELEIISVDMDIESNGEAFPSIEVLKTNILDRKTNERIEGIIGNN
CEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHEEECCC
FSSYVRDYDFSVRLLDHNKGQEKFSIPEDFGDLHGKLFKYFVNSDAYKKNFNKPPVICLS
HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEE
VSDNKTYYRTENQHPVLGFEYQPNESSLTEQYFKKMGLQVRYFMPPNSVAPLAFYFFGDL
ECCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
LNDYSNLELISTISTMGTFQKIYRPEIYNANAVAGNCYQPNLKNLDHSLTQIVYDREERS
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHH
KLAIEQGKFAEETFIKPYQSVLENWSANYAL
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA