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The map label for this gene is yieP [H]

Identifier: 218709243

GI number: 218709243

Start: 1346151

End: 1346882

Strand: Reverse

Name: yieP [H]

Synonym: VS_1250

Alternate gene names: 218709243

Gene position: 1346882-1346151 (Counterclockwise)

Preceding gene: 218709247

Following gene: 218709242

Centisome position: 40.82

GC content: 43.85

Gene sequence:

>732_bases
GTGGTTTATATGGCTATATTTTCATTGGTGGCAGATTCAAGCCGCCGAATTCATGTTCAAGTGGCTCGACAGATTGCGCG
TAAAATTCTGTCGGGAGAGCTCAAAGAAAAAGAGAAATTACCCAGTGAAATGGAGTTGTGTGAAGTCTTTGGCGTCAGTC
GAACTGCACTTCGCGAATCGACAAAGCTACTTTCAGCCAAAGGGCTTATCGAATCAAAACCTAAAGTGGGGACTCATATC
AGGCCACGTACTCAATGGCACTTTTTAGACCCTCAACTCCTAGATTGGATTCAAGATCTGGAAGACACCAAACCCTTCTT
ATCTCAATTTTTAGGCTTAAGAAAAGCGATTGACCCAGAAGCGTGTGCGCTTGCGGCATCCAACGCTACGGTAGAGCAAC
GTAAAGAGCTTTCGATTCTTTTCCAAAAGATGACCATCGCAGCAAATGGCTTTGATTATGAAGAGTGGACAACCAACGAT
CATCTGTTTCACCAAACGATTTTCTTGTCGACGGGTAACCAGTTTTACATTCCGTTCGCGAACATTCTGTCGACGATTTT
CAAACAGTTTATCGACCACTCTGCCGAAGGCGGTCGCTTCTGTTTAGAAGAGCATAAAGCGATATATGATGCGATTATGT
CAGGCAATGCGAATCAGGCTCGAATAGCCTCTCAAGCTTTACTTGATGATGAAAATCAAAAGCTGTCTAGGGTTGAATTA
GCCATCGCATAA

Upstream 100 bases:

>100_bases
ATGTTTGACTCGATAGCCGCTACAAGCATTATCCCTCAAGCTTAAAGTCGCGCTAACTTAAATCTATCCGCTGTTTTTAT
ACTTAATACGTCAGCCTGAG

Downstream 100 bases:

>100_bases
CCAAGATTGACCAGACTGACTCGTGTATCCCAATACACGAGTCAGTCAGTTTTAGCGCCCATTTTTAACCATCCATTACC
GTAGTGTTTCATCTTTAAAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MVYMAIFSLVADSSRRIHVQVARQIARKILSGELKEKEKLPSEMELCEVFGVSRTALRESTKLLSAKGLIESKPKVGTHI
RPRTQWHFLDPQLLDWIQDLEDTKPFLSQFLGLRKAIDPEACALAASNATVEQRKELSILFQKMTIAANGFDYEEWTTND
HLFHQTIFLSTGNQFYIPFANILSTIFKQFIDHSAEGGRFCLEEHKAIYDAIMSGNANQARIASQALLDDENQKLSRVEL
AIA

Sequences:

>Translated_243_residues
MVYMAIFSLVADSSRRIHVQVARQIARKILSGELKEKEKLPSEMELCEVFGVSRTALRESTKLLSAKGLIESKPKVGTHI
RPRTQWHFLDPQLLDWIQDLEDTKPFLSQFLGLRKAIDPEACALAASNATVEQRKELSILFQKMTIAANGFDYEEWTTND
HLFHQTIFLSTGNQFYIPFANILSTIFKQFIDHSAEGGRFCLEEHKAIYDAIMSGNANQARIASQALLDDENQKLSRVEL
AIA
>Mature_243_residues
MVYMAIFSLVADSSRRIHVQVARQIARKILSGELKEKEKLPSEMELCEVFGVSRTALRESTKLLSAKGLIESKPKVGTHI
RPRTQWHFLDPQLLDWIQDLEDTKPFLSQFLGLRKAIDPEACALAASNATVEQRKELSILFQKMTIAANGFDYEEWTTND
HLFHQTIFLSTGNQFYIPFANILSTIFKQFIDHSAEGGRFCLEEHKAIYDAIMSGNANQARIASQALLDDENQKLSRVEL
AIA

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=208, Percent_Identity=36.5384615384615, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI48994955, Length=218, Percent_Identity=27.5229357798165, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789353, Length=249, Percent_Identity=26.9076305220884, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786303, Length=211, Percent_Identity=27.0142180094787, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27544; Mature: 27544

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYMAIFSLVADSSRRIHVQVARQIARKILSGELKEKEKLPSEMELCEVFGVSRTALRES
CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHHHH
TKLLSAKGLIESKPKVGTHIRPRTQWHFLDPQLLDWIQDLEDTKPFLSQFLGLRKAIDPE
HHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
ACALAASNATVEQRKELSILFQKMTIAANGFDYEEWTTNDHLFHQTIFLSTGNQFYIPFA
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEEEEEECCCEEEEEHH
NILSTIFKQFIDHSAEGGRFCLEEHKAIYDAIMSGNANQARIASQALLDDENQKLSRVEL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHEEE
AIA
EEC
>Mature Secondary Structure
MVYMAIFSLVADSSRRIHVQVARQIARKILSGELKEKEKLPSEMELCEVFGVSRTALRES
CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHHHH
TKLLSAKGLIESKPKVGTHIRPRTQWHFLDPQLLDWIQDLEDTKPFLSQFLGLRKAIDPE
HHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH
ACALAASNATVEQRKELSILFQKMTIAANGFDYEEWTTNDHLFHQTIFLSTGNQFYIPFA
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEEEEEECCCEEEEEHH
NILSTIFKQFIDHSAEGGRFCLEEHKAIYDAIMSGNANQARIASQALLDDENQKLSRVEL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHEEE
AIA
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]