Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709203

Identifier: 218709203

GI number: 218709203

Start: 1283608

End: 1284312

Strand: Reverse

Name: 218709203

Synonym: VS_1210

Alternate gene names: NA

Gene position: 1284312-1283608 (Counterclockwise)

Preceding gene: 218709204

Following gene: 218709202

Centisome position: 38.93

GC content: 42.7

Gene sequence:

>705_bases
ATGATTAAGTTGTCGATGGATAAGAAAAAAGCCCTAAAGAAAATTGCCAAGTGTCTTGAGCTTGGAAACTCTGCGAACGT
CAATGAAGCTGCCAATGCGATAAAAATGGCGCATAACTTGATGCTGAAATATGGTCTCGAAAAGGACGATATTGAATTTA
TCAAGATGGGAAAAACTCAATCCAGTCACCTGTTACCTGCAAATATCAGCTCTACACTGCTGCGTGTTATTCGTGGTATT
AACACCAAGTTTGGCGTAGAAGCCGTGTTACTGAATCACAAAGGCCTTAAGCGCGTTGAATTCATTGGTGAAGCCGATCG
CGCTATCTTCGCAGCTTTTGCGTTCGATATTATTTATCGCGAACTGAATGAGCACACTGGCCAATTCAGAAACAGTTTTG
CGGGCTCGGGAACAGGGACACTAGAAGTAACACGTCGCGTAAACTCTTACGTTTCGGGTTGGGTAGAAGGTGCGCTTGAA
AAACTGCCTGTTATCACCCCAGACGACGAGTCAAACAACAAGATCAATAACTACATTGATAAAGAATTCCAAAACATCGA
CCGCGAAACGTTCAAACAACAACTCAGAGAAGCGATGAAAAACCTCACCGCAGACTATGAAGTTGGTTTGAAGAAAGGTC
GAAAACTGTCTGTAAATCGACCTGTTGGCGGAACTCAAGCCGTTAAAAAGATAACTAAATCATAG

Upstream 100 bases:

>100_bases
TATCTTCCATAATCGTTCACCACATTCCTACAAATGACTTTTGACTTTGCTGTTACTCGCCAAAACATGTAAAATGTTGG
ACTTTTAAAAATTTGCGGTA

Downstream 100 bases:

>100_bases
AGCCACTTTACATTGCTTCAGCGTATTGATAAAAACCACCAATAGGACTTATTGTTGTCTTTCGTAATTCATGCGTTTGA
CAGAAGTACATGATGGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIKLSMDKKKALKKIAKCLELGNSANVNEAANAIKMAHNLMLKYGLEKDDIEFIKMGKTQSSHLLPANISSTLLRVIRGI
NTKFGVEAVLLNHKGLKRVEFIGEADRAIFAAFAFDIIYRELNEHTGQFRNSFAGSGTGTLEVTRRVNSYVSGWVEGALE
KLPVITPDDESNNKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKLSVNRPVGGTQAVKKITKS

Sequences:

>Translated_234_residues
MIKLSMDKKKALKKIAKCLELGNSANVNEAANAIKMAHNLMLKYGLEKDDIEFIKMGKTQSSHLLPANISSTLLRVIRGI
NTKFGVEAVLLNHKGLKRVEFIGEADRAIFAAFAFDIIYRELNEHTGQFRNSFAGSGTGTLEVTRRVNSYVSGWVEGALE
KLPVITPDDESNNKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKLSVNRPVGGTQAVKKITKS
>Mature_234_residues
MIKLSMDKKKALKKIAKCLELGNSANVNEAANAIKMAHNLMLKYGLEKDDIEFIKMGKTQSSHLLPANISSTLLRVIRGI
NTKFGVEAVLLNHKGLKRVEFIGEADRAIFAAFAFDIIYRELNEHTGQFRNSFAGSGTGTLEVTRRVNSYVSGWVEGALE
KLPVITPDDESNNKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKLSVNRPVGGTQAVKKITKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26162; Mature: 26162

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSMDKKKALKKIAKCLELGNSANVNEAANAIKMAHNLMLKYGLEKDDIEFIKMGKTQ
CEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
SSHLLPANISSTLLRVIRGINTKFGVEAVLLNHKGLKRVEFIGEADRAIFAAFAFDIIYR
CCCCCCCCHHHHHHHHHHHCCCHHCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELNEHTGQFRNSFAGSGTGTLEVTRRVNSYVSGWVEGALEKLPVITPDDESNNKINNYID
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
KEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKLSVNRPVGGTQAVKKITKS
HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIKLSMDKKKALKKIAKCLELGNSANVNEAANAIKMAHNLMLKYGLEKDDIEFIKMGKTQ
CEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
SSHLLPANISSTLLRVIRGINTKFGVEAVLLNHKGLKRVEFIGEADRAIFAAFAFDIIYR
CCCCCCCCHHHHHHHHHHHCCCHHCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELNEHTGQFRNSFAGSGTGTLEVTRRVNSYVSGWVEGALEKLPVITPDDESNNKINNYID
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
KEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKLSVNRPVGGTQAVKKITKS
HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA