Click here to switch to the map view.

The map label for this gene is 218709163

Identifier: 218709163

GI number: 218709163

Start: 1240135

End: 1240383

Strand: Reverse

Name: 218709163

Synonym: VS_1170

Alternate gene names: NA

Gene position: 1240383-1240135 (Counterclockwise)

Preceding gene: 218709164

Following gene: 218709162

Centisome position: 37.6

GC content: 44.18

Gene sequence:

>249_bases
GTGTCTAAAAACCGGGAGGTCATTGAAATGAAACGTGCAAGCTCTACATATCGATTACAACTGATTAAGGAAGTGGCTAC
TCGCCGAGATCGTCAGCGTTCTAATGACCCGATGGCAAACTACATACAAAACCTAATAGACAACAAAGATGACTGTGATA
CCTCGGTGGAACGTAACCAGAGATTCAGTGGCAGTCATTTTGATGAGCATATTGGTGGTTGGGTTAGCGACCATTGGGGT
AGCAAGTAA

Upstream 100 bases:

>100_bases
TATGAATTATGATGCCAAGGTATTGATTCTTGGTTGCTCAAAAAAAATACTCTAAAATCACGTTGACGCCCCTATATCTG
ACAACTAGATTTTTCTATTA

Downstream 100 bases:

>100_bases
GCCTATATCTCTAGTCACTGATATAGTCGATAGAACAGCATCGTTAGCTGTAGAATTAATATCCGTATTAACCTATCATC
TGCAACAATTCCCTATCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSKNREVIEMKRASSTYRLQLIKEVATRRDRQRSNDPMANYIQNLIDNKDDCDTSVERNQRFSGSHFDEHIGGWVSDHWG
SK

Sequences:

>Translated_82_residues
MSKNREVIEMKRASSTYRLQLIKEVATRRDRQRSNDPMANYIQNLIDNKDDCDTSVERNQRFSGSHFDEHIGGWVSDHWG
SK
>Mature_81_residues
SKNREVIEMKRASSTYRLQLIKEVATRRDRQRSNDPMANYIQNLIDNKDDCDTSVERNQRFSGSHFDEHIGGWVSDHWGS
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9657; Mature: 9526

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNREVIEMKRASSTYRLQLIKEVATRRDRQRSNDPMANYIQNLIDNKDDCDTSVERNQ
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHC
RFSGSHFDEHIGGWVSDHWGSK
CCCCCCCHHHHCCHHCCCCCCC
>Mature Secondary Structure 
SKNREVIEMKRASSTYRLQLIKEVATRRDRQRSNDPMANYIQNLIDNKDDCDTSVERNQ
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHC
RFSGSHFDEHIGGWVSDHWGSK
CCCCCCCHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA