Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is ybaM [C]

Identifier: 218709058

GI number: 218709058

Start: 1120040

End: 1120210

Strand: Reverse

Name: ybaM [C]

Synonym: VS_1064

Alternate gene names: 218709058

Gene position: 1120210-1120040 (Counterclockwise)

Preceding gene: 218709059

Following gene: 218709057

Centisome position: 33.95

GC content: 42.11

Gene sequence:

>171_bases
ATGAACACTGATAACCCATCATCACCACTGGATAACGCCCCAGAAGAAGTTAAGTTAGCTGTCGACCTGATCTATCTGCT
CGAAAGCAACGAAATCGATCCAAAGGTTGCGTTAGAAGCAATTAAGATTGTCCAACAAGATTTACAAGCCAAACTAGCAT
CTAGCATCTAG

Upstream 100 bases:

>100_bases
GCGGACGAGGCTTGGCAATTAGCAAAAGAACGATTAGAACGCTGCGAAGACTCAATGAAAAATATTGAGAGACTGATTAA
CTTAGAGAACCCCAAGCGAA

Downstream 100 bases:

>100_bases
CATCTAGCATCTAGCATCTAGCATCTAGCATCTAGCATCTAGCATAAAAACATACAGGATTCACATGTACCAACTTAGCT
TTTCTATGCCCGAGTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI

Sequences:

>Translated_56_residues
MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI
>Mature_56_residues
MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6106; Mature: 6106

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA