| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pykA [H]
Identifier: 218709031
GI number: 218709031
Start: 1078987
End: 1080435
Strand: Reverse
Name: pykA [H]
Synonym: VS_1037
Alternate gene names: 218709031
Gene position: 1080435-1078987 (Counterclockwise)
Preceding gene: 218709034
Following gene: 218709029
Centisome position: 32.75
GC content: 48.03
Gene sequence:
>1449_bases ATGACAGCCGAATTAAGAAAAACGAAAATCGTCACAACGCTAGGCCCTTCTACTGATAAAGGTAACGTGCTTGAAGAGAT CATCAAAGCCGGTGCCAATGTCGTCCGTATGAACTTCTCTCACGGCACTAGCGACGACCATATACAACGTGCAGAAAATG TCCGCGCAATAGCCAAAAAACTTGGTACTCAGATCGCTATTCTCGGTGACTTACAAGGTCCCAAGATTCGAGTGTCAACA TTCAAAGATGGCAAAATCCAACTTGCCGTTGGTGACCAATTTACTCTCGACAGTAGCCTTGGTTTAGGCGAAGGCAACCA ACAAGCGGTCGGTCTTGATTATAAAGAATTACCTAACGACGTTTCAGCTAACGACATCCTGTTGCTAGACGATGGTCGTG TACAGCTAAAAGTAACCGAAGTGGAAGGTTGTCGCGTTCATACCGAAGTCATCATTGGCGGCCCTCTCTCGAATAATAAA GGCATAAACAAAAAAGGCGGCGGCTTGTCAGCAGAAGCGCTGACAGAAAAAGACAAACGCGACATCGTCACCGCCGCACA AATCAAAGTGGATTACCTTGCGGTGTCTTTCCCACGCAACGGCGAAGACATGCACTACGCTCGTCAACTCGCACGAGAAG CAGGTTTAGAAGCTCACCTTGTAGCAAAAGTAGAGCGAGCAGAGACGGTCGCCACTGTTGAGAACATGGATGACATCATA ATGGCCTCAGATGTGGTCATGGTAGCTCGTGGTGACCTCGGAGTCGAAATTGGCGACCCTGAATTGGTCGGAGTACAAAA ACAGCTTATACGTCGTGCTAGAGCGCTTAACCGAACGGTGATCACCGCAACTCAAATGATGGAATCGATGATTTCAGCGC CAATGCCAACCCGTGCCGAAGTCATGGACGTTGCCAATGCGGTACTTGATGGAACAGATGCGGTCATGCTTTCAGGTGAA ACAGCTGCAGGTGATTACCCGGTCGAAACCGTAAAATCGATGGCTGAAGTGTGTATTGGTGCTGAGAAAATGGCGGGGAT TAACAACCAATCCAATTACCGAATTGACCGCACGTTTGTGACCGCCGAAGAAACCGTTTCGATGGCGACTATCTACTCGG CAAACCATATGGAAGGCATTAAAGGCGTAGTCACTCTCACTGAATCAGGCCGTACTGCACTGATGATGTCTCGTCTAAGT GCAGATATGCCTATCTACGCACTATCTCGTAACGAAGGAACACTTAATCGCTGCACCTTGTACCGAGGTGTAACACCAAT CTACTTCGAGACAGAAGCCAAAGACAGTTTTGACATTGCCCTATCTACGCTCACCTGCCTAAAAGAGCAAGAGCATCTTA AGTTTGGCGATCTCGTTATCGTCACTCAAGGCGACATTATGGATGTGGCGGGATCAACCAACTGTATGAGAATCTTGCCT GTCACCTAA
Upstream 100 bases:
>100_bases CCTTGTATAAATACCCAGCAACTCGCTGCAAAAATCAGCTCGAAAGATCAACACGCCCTAGTCTTTTAAAAGATTACTTG GCCTCACTCTAGGAGTATTC
Downstream 100 bases:
>100_bases TGTTTGCCCGTAAGGCGAAACGATTTGCCTAATCTCATGACAAAAAAGGGTTATCGAACCAAGTTCAATAACCCTTTTCA TTTCAGAACACGACTCACTA
Product: pyruvate kinase II
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTAELRKTKIVTTLGPSTDKGNVLEEIIKAGANVVRMNFSHGTSDDHIQRAENVRAIAKKLGTQIAILGDLQGPKIRVST FKDGKIQLAVGDQFTLDSSLGLGEGNQQAVGLDYKELPNDVSANDILLLDDGRVQLKVTEVEGCRVHTEVIIGGPLSNNK GINKKGGGLSAEALTEKDKRDIVTAAQIKVDYLAVSFPRNGEDMHYARQLAREAGLEAHLVAKVERAETVATVENMDDII MASDVVMVARGDLGVEIGDPELVGVQKQLIRRARALNRTVITATQMMESMISAPMPTRAEVMDVANAVLDGTDAVMLSGE TAAGDYPVETVKSMAEVCIGAEKMAGINNQSNYRIDRTFVTAEETVSMATIYSANHMEGIKGVVTLTESGRTALMMSRLS ADMPIYALSRNEGTLNRCTLYRGVTPIYFETEAKDSFDIALSTLTCLKEQEHLKFGDLVIVTQGDIMDVAGSTNCMRILP VT
Sequences:
>Translated_482_residues MTAELRKTKIVTTLGPSTDKGNVLEEIIKAGANVVRMNFSHGTSDDHIQRAENVRAIAKKLGTQIAILGDLQGPKIRVST FKDGKIQLAVGDQFTLDSSLGLGEGNQQAVGLDYKELPNDVSANDILLLDDGRVQLKVTEVEGCRVHTEVIIGGPLSNNK GINKKGGGLSAEALTEKDKRDIVTAAQIKVDYLAVSFPRNGEDMHYARQLAREAGLEAHLVAKVERAETVATVENMDDII MASDVVMVARGDLGVEIGDPELVGVQKQLIRRARALNRTVITATQMMESMISAPMPTRAEVMDVANAVLDGTDAVMLSGE TAAGDYPVETVKSMAEVCIGAEKMAGINNQSNYRIDRTFVTAEETVSMATIYSANHMEGIKGVVTLTESGRTALMMSRLS ADMPIYALSRNEGTLNRCTLYRGVTPIYFETEAKDSFDIALSTLTCLKEQEHLKFGDLVIVTQGDIMDVAGSTNCMRILP VT >Mature_481_residues TAELRKTKIVTTLGPSTDKGNVLEEIIKAGANVVRMNFSHGTSDDHIQRAENVRAIAKKLGTQIAILGDLQGPKIRVSTF KDGKIQLAVGDQFTLDSSLGLGEGNQQAVGLDYKELPNDVSANDILLLDDGRVQLKVTEVEGCRVHTEVIIGGPLSNNKG INKKGGGLSAEALTEKDKRDIVTAAQIKVDYLAVSFPRNGEDMHYARQLAREAGLEAHLVAKVERAETVATVENMDDIIM ASDVVMVARGDLGVEIGDPELVGVQKQLIRRARALNRTVITATQMMESMISAPMPTRAEVMDVANAVLDGTDAVMLSGET AAGDYPVETVKSMAEVCIGAEKMAGINNQSNYRIDRTFVTAEETVSMATIYSANHMEGIKGVVTLTESGRTALMMSRLSA DMPIYALSRNEGTLNRCTLYRGVTPIYFETEAKDSFDIALSTLTCLKEQEHLKFGDLVIVTQGDIMDVAGSTNCMRILPV T
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=35.7575757575758, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI33286422, Length=496, Percent_Identity=35.4838709677419, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI33286420, Length=496, Percent_Identity=35.4838709677419, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI32967597, Length=500, Percent_Identity=34.6, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI10835121, Length=502, Percent_Identity=34.6613545816733, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=33.7931034482759, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=33.7931034482759, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI310128736, Length=236, Percent_Identity=31.7796610169492, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI310128734, Length=236, Percent_Identity=31.7796610169492, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=31.1627906976744, Blast_Score=102, Evalue=8e-22, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=67.983367983368, Blast_Score=660, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=478, Percent_Identity=37.6569037656904, Blast_Score=293, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17544584, Length=490, Percent_Identity=35.7142857142857, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17506831, Length=491, Percent_Identity=34.826883910387, Blast_Score=240, Evalue=9e-64, Organism=Caenorhabditis elegans, GI71984413, Length=491, Percent_Identity=34.826883910387, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI71984406, Length=491, Percent_Identity=34.826883910387, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17506829, Length=491, Percent_Identity=34.826883910387, Blast_Score=240, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6319279, Length=493, Percent_Identity=35.2941176470588, Blast_Score=253, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6324923, Length=441, Percent_Identity=34.6938775510204, Blast_Score=235, Evalue=1e-62, Organism=Drosophila melanogaster, GI28571814, Length=501, Percent_Identity=36.5269461077844, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24648964, Length=501, Percent_Identity=36.5269461077844, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24648966, Length=419, Percent_Identity=36.9928400954654, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24581235, Length=488, Percent_Identity=29.5081967213115, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24646914, Length=270, Percent_Identity=34.4444444444444, Blast_Score=147, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 52038; Mature: 51907
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAELRKTKIVTTLGPSTDKGNVLEEIIKAGANVVRMNFSHGTSDDHIQRAENVRAIAKK CCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGTQIAILGDLQGPKIRVSTFKDGKIQLAVGDQFTLDSSLGLGEGNQQAVGLDYKELPND HCCEEEEEECCCCCEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCEECCCHHHCCCC VSANDILLLDDGRVQLKVTEVEGCRVHTEVIIGGPLSNNKGINKKGGGLSAEALTEKDKR CCCCEEEEEECCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHH DIVTAAQIKVDYLAVSFPRNGEDMHYARQLAREAGLEAHLVAKVERAETVATVENMDDII CCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCE MASDVVMVARGDLGVEIGDPELVGVQKQLIRRARALNRTVITATQMMESMISAPMPTRAE EECCEEEEEECCCCEEECCCCEECHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSGETAAGDYPVETVKSMAEVCIGAEKMAGINNQSNYRIDRTFV HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEEEE TAEETVSMATIYSANHMEGIKGVVTLTESGRTALMMSRLSADMPIYALSRNEGTLNRCTL EHHHHEEEEEEECCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEECCCCCCCEEEE YRGVTPIYFETEAKDSFDIALSTLTCLKEQEHLKFGDLVIVTQGDIMDVAGSTNCMRILP ECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCEEEEEE VT CC >Mature Secondary Structure TAELRKTKIVTTLGPSTDKGNVLEEIIKAGANVVRMNFSHGTSDDHIQRAENVRAIAKK CCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LGTQIAILGDLQGPKIRVSTFKDGKIQLAVGDQFTLDSSLGLGEGNQQAVGLDYKELPND HCCEEEEEECCCCCEEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCEECCCHHHCCCC VSANDILLLDDGRVQLKVTEVEGCRVHTEVIIGGPLSNNKGINKKGGGLSAEALTEKDKR CCCCEEEEEECCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHH DIVTAAQIKVDYLAVSFPRNGEDMHYARQLAREAGLEAHLVAKVERAETVATVENMDDII CCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCE MASDVVMVARGDLGVEIGDPELVGVQKQLIRRARALNRTVITATQMMESMISAPMPTRAE EECCEEEEEECCCCEEECCCCEECHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHH VMDVANAVLDGTDAVMLSGETAAGDYPVETVKSMAEVCIGAEKMAGINNQSNYRIDRTFV HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCEEEEEEEE TAEETVSMATIYSANHMEGIKGVVTLTESGRTALMMSRLSADMPIYALSRNEGTLNRCTL EHHHHEEEEEEECCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEECCCCCCCEEEE YRGVTPIYFETEAKDSFDIALSTLTCLKEQEHLKFGDLVIVTQGDIMDVAGSTNCMRILP ECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCEEEEEE VT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]