| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yejL [C]
Identifier: 218708946
GI number: 218708946
Start: 977871
End: 978098
Strand: Reverse
Name: yejL [C]
Synonym: VS_0950
Alternate gene names: 218708946
Gene position: 978098-977871 (Counterclockwise)
Preceding gene: 218708950
Following gene: 218708945
Centisome position: 29.65
GC content: 37.28
Gene sequence:
>228_bases ATGCCGATTATATCTAAATACACAGATGATCAAGTTGAAAAAATCCTAGCTGAAGTAGGTGCTGTACTGACTAAGCACAA AGCTTCACCTGAGCTTTCATTGATGATCGCTGGAAATATCGCAACCAATGTCTTAAATCAGAACGTTGCTGCTTCACAAC GCAAAGGAATTGCTGAAAAATTTGCCGAAGCTTTAATTTCTTCTCTTGAAGATAAAAAGTCTCACTAA
Upstream 100 bases:
>100_bases AAAGGTGAAGGCTCATAGCGAAAATATTACCGTTCAGGTTTCAGTTGTTGTGCATAGTAGGTTATCATAAGCCGCTTTTA CTATCATTATTAGAGTCCTT
Downstream 100 bases:
>100_bases GTTTGATTGACGGAAAAAGAATTATAAATGGTAGACAGCGCAAACTCATATAGCGATCGTGTATCTCGACTGGTAGGTTG GGGCCACTGGTTTGCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPIISKYTDDQVEKILAEVGAVLTKHKASPELSLMIAGNIATNVLNQNVAASQRKGIAEKFAEALISSLEDKKSH
Sequences:
>Translated_75_residues MPIISKYTDDQVEKILAEVGAVLTKHKASPELSLMIAGNIATNVLNQNVAASQRKGIAEKFAEALISSLEDKKSH >Mature_74_residues PIISKYTDDQVEKILAEVGAVLTKHKASPELSLMIAGNIATNVLNQNVAASQRKGIAEKFAEALISSLEDKKSH
Specific function: Unknown
COG id: COG3082
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0352 family
Homologues:
Organism=Escherichia coli, GI1788514, Length=75, Percent_Identity=53.3333333333333, Blast_Score=87, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y950_VIBSL (B7VLC8)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002416567.1 - ProteinModelPortal: B7VLC8 - SMR: B7VLC8 - GeneID: 7160544 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0950 - HOGENOM: HBG296839 - OMA: HQAPTDL - ProtClustDB: PRK13689 - HAMAP: MF_00816 - InterPro: IPR009857 - InterPro: IPR023202 - PIRSF: PIRSF006188 - ProDom: PD027794
Pfam domain/function: PF07208 DUF1414
EC number: NA
Molecular weight: Translated: 8076; Mature: 7945
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIISKYTDDQVEKILAEVGAVLTKHKASPELSLMIAGNIATNVLNQNVAASQRKGIAEK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHH FAEALISSLEDKKSH HHHHHHHHHHHCCCC >Mature Secondary Structure PIISKYTDDQVEKILAEVGAVLTKHKASPELSLMIAGNIATNVLNQNVAASQRKGIAEK CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHH FAEALISSLEDKKSH HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA