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The map label for this gene is recR

Identifier: 218708916

GI number: 218708916

Start: 944352

End: 944951

Strand: Direct

Name: recR

Synonym: VS_0918

Alternate gene names: 218708916

Gene position: 944352-944951 (Clockwise)

Preceding gene: 218708915

Following gene: 218708918

Centisome position: 28.62

GC content: 48.67

Gene sequence:

>600_bases
ATGCGTACCAGTCATATGCTGGAGCATTTGATGGAGGCCTTACGTTGTCTACCTGGGGTTGGCCCCAAGTCGGCGCAGCG
TATGGCCTTTCATTTGTTACAGCGCGATAGAAAAGGCGGCCTGCAGTTGGCTGAAGCTCTTAGCCAAGCAATGACAGAAA
TTGGTCATTGTAATGAGTGCCGTACTTTTACCGAAGAAGAGACCTGCCACATTTGTACCAATCCTAAACGTCAGGATAAC
GGTCAAATTTGTGTAGTAGAGAGCCCTGCAGACATTGCAGCCATTGAAGCAACGGGTCAATATTCCGGTCGTTACTTTGT
GCTTATGGGACATCTTTCACCACTTGATGGTATTGGTCCAAGTGACATCGGTCTCGATGTCTTGGATTACCGCTTACGTC
GTGGTGATATCACTGAAGTTATTTTAGCGACTAACCCGACAGTAGAAGGGGAGGCGACAGCACATTACATTGCTGAGCTA
TGTAATGCCCATGAAGTGAACGCTAGCCGTATCGCCCATGGTGTTCCTGTTGGTGGTGAGCTCGAGCTGGTGGATGGCAC
CACGCTTTCACACTCGTTACTCGGTCGTCATAAAATCTAA

Upstream 100 bases:

>100_bases
AGGTATGAAGATGCCTTTCTAAGTAACTTATTCTTAAAGGTTAATTCACGTAGTAGCTTGTGTTGAACTGGCCATTACTT
GAAAATCAGAACGGTTATAT

Downstream 100 bases:

>100_bases
AAAAAGCCGCTTGGTGAACCATCACCAAGCGGCTTTTTCTTTTATGCTTCTCAAAGGTTTTTATTCCAAAACACTTCTCT
GAGCTTAATCTGAACCTCTC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRTSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNECRTFTEEETCHICTNPKRQDN
GQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAEL
CNAHEVNASRIAHGVPVGGELELVDGTTLSHSLLGRHKI

Sequences:

>Translated_199_residues
MRTSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNECRTFTEEETCHICTNPKRQDN
GQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAEL
CNAHEVNASRIAHGVPVGGELELVDGTTLSHSLLGRHKI
>Mature_199_residues
MRTSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNECRTFTEEETCHICTNPKRQDN
GQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAEL
CNAHEVNASRIAHGVPVGGELELVDGTTLSHSLLGRHKI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=79.8994974874372, Blast_Score=333, Evalue=7e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_VIBSL (B7VL98)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416537.1
- ProteinModelPortal:   B7VL98
- SMR:   B7VL98
- GeneID:   7160514
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0918
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21678; Mature: 21678

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNEC
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
RTFTEEETCHICTNPKRQDNGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGP
CCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
SDIGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGE
CCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCE
LELVDGTTLSHSLLGRHKI
EEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MRTSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQAMTEIGHCNEC
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
RTFTEEETCHICTNPKRQDNGQICVVESPADIAAIEATGQYSGRYFVLMGHLSPLDGIGP
CCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
SDIGLDVLDYRLRRGDITEVILATNPTVEGEATAHYIAELCNAHEVNASRIAHGVPVGGE
CCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCE
LELVDGTTLSHSLLGRHKI
EEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA