Click here to switch to the map view.

The map label for this gene is 218708797

Identifier: 218708797

GI number: 218708797

Start: 816824

End: 817246

Strand: Reverse

Name: 218708797

Synonym: VS_0797

Alternate gene names: NA

Gene position: 817246-816824 (Counterclockwise)

Preceding gene: 218708798

Following gene: 218708796

Centisome position: 24.77

GC content: 41.84

Gene sequence:

>423_bases
GTGTTTGGTTCGTTTTCGACTATTGAGCTAAAAATTGCTAAAGTATTCTCACCCATGGTCGATATTGACTGTACAGGTTC
CCATTTTGAAGAAAAAGGCTTAACTATGGCAGGTATTGATAATATTCGTTCAGGGCAAACCCTAGCGAGCACTAACCGCT
CAACAGTGCGCTCTGATTCTAAGTCTGAGGCATCAAGATCTGATGCATCATCTAAATCACCAGCAAGCAAAGATGCGGTT
TCACTAAGCCAACAAGGCAAGGCGATTGGTCAACTCCATCAAGAGATGGCAGCACAACCAAGTTTCGATTCAGTGAAAGT
CGCGGCAATAAAAGAAGCGATCGCAAATGGTTCATACACTGTTGATCCAGAAAAGTTGGCCGACAACATGATGAAATTTG
AAAACGAATTAAAAGGTCTTTAA

Upstream 100 bases:

>100_bases
CATGTCTGAAGTCACGGTTTACTTTTAACACTTCACTTTAAAGTGTCGGTATCGTTAGCGCTTTTATTCTCAACTCTAAC
ATCCAATTATAACGGTTGAG

Downstream 100 bases:

>100_bases
GCAAACATTAGCTTTAAAATAAAGTTATTATCTTAAAGTACACGAGGTTATTAGTAGGTTACATTATGGCGGCACTAGCA
GATTTAGTTAATTTCCAACT

Product: polar flagellar FlgM-like protein

Products: NA

Alternate protein names: Polar Flagellar FlgM; Polar Flagellar FlgM-Like Protein; Flagellar Anti-Sigma-28 Factor FlgM; Anti-Sigma28 Factor

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFGSFSTIELKIAKVFSPMVDIDCTGSHFEEKGLTMAGIDNIRSGQTLASTNRSTVRSDSKSEASRSDASSKSPASKDAV
SLSQQGKAIGQLHQEMAAQPSFDSVKVAAIKEAIANGSYTVDPEKLADNMMKFENELKGL

Sequences:

>Translated_140_residues
MFGSFSTIELKIAKVFSPMVDIDCTGSHFEEKGLTMAGIDNIRSGQTLASTNRSTVRSDSKSEASRSDASSKSPASKDAV
SLSQQGKAIGQLHQEMAAQPSFDSVKVAAIKEAIANGSYTVDPEKLADNMMKFENELKGL
>Mature_140_residues
MFGSFSTIELKIAKVFSPMVDIDCTGSHFEEKGLTMAGIDNIRSGQTLASTNRSTVRSDSKSEASRSDASSKSPASKDAV
SLSQQGKAIGQLHQEMAAQPSFDSVKVAAIKEAIANGSYTVDPEKLADNMMKFENELKGL

Specific function: Unknown

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14938; Mature: 14938

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGSFSTIELKIAKVFSPMVDIDCTGSHFEEKGLTMAGIDNIRSGQTLASTNRSTVRSDS
CCCCCCHHHHHHHHHHCCHHCCCCCCCCHHHCCCEEECCCCCCCCCHHHHCCCHHHHCCC
KSEASRSDASSKSPASKDAVSLSQQGKAIGQLHQEMAAQPSFDSVKVAAIKEAIANGSYT
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE
VDPEKLADNMMKFENELKGL
ECHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGSFSTIELKIAKVFSPMVDIDCTGSHFEEKGLTMAGIDNIRSGQTLASTNRSTVRSDS
CCCCCCHHHHHHHHHHCCHHCCCCCCCCHHHCCCEEECCCCCCCCCHHHHCCCHHHHCCC
KSEASRSDASSKSPASKDAVSLSQQGKAIGQLHQEMAAQPSFDSVKVAAIKEAIANGSYT
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCE
VDPEKLADNMMKFENELKGL
ECHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA