| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708778
Identifier: 218708778
GI number: 218708778
Start: 800834
End: 801532
Strand: Reverse
Name: 218708778
Synonym: VS_0777
Alternate gene names: NA
Gene position: 801532-800834 (Counterclockwise)
Preceding gene: 218708779
Following gene: 218708777
Centisome position: 24.29
GC content: 44.78
Gene sequence:
>699_bases ATGAGTCTGTTTAAACACGGGCGTAAGCAAATCAGTATCGCACTGCTAGGGCTTGCTTCAATGATGGCGAGCCACTTTGC TGGCGCTAGCGAGAACACGAATGCTGTCGGCTCTATTACAGAACTACAAACCGTGTTAAGCGAAAATAGTATCGTTCGTG GTGAGTTTACTCAAACACGTAACATGGAAATGTTCGCCCAACCTCTAACATCACAAGGTACTTTCCTGTTAGACAAGTCG AATGGTTTGCTTTGGACACAAGCGACCCCCTTTCCTGTGAGCTTGGTGCTCACGGATAACAAACTGAGCCAAAGATTTGC CGATCAACCCGCTAAGATCATTACCGATAAAGAAAACCCAATGGCATTTTATTTCAGCCATATATTCCTGTCGGTGTTTC ACGGGGACACGCAAAAACTTCAAGAGCAATTCTCACTGTCATTTGAACCAGCGACTGAGAAAAATTCTGATGAAAGTGCA AACTCAAGTTCAGAAGACACACGATGGACACTCACTCTAAAGCCAAAGAATGCGCCAATGAACGCGGTGTTTGAAGCCAT CACACTGCAAGGAAAAGGTGACATTGAACGTATCGAACTTAGAGAAGTTCGTGGGGACAGCACTGTGATCGAATTTAGCC AGTTAAGCCATCTACCGGAAGTATTATCAGATGCTGAAGCGCAACAATTCCAATTCTAG
Upstream 100 bases:
>100_bases TGGCATCAATTTGGCTGCTTACCCCAATCAACTGAGCAGCAATCAAACGATCACCAATCAGAGCAACCGCAAGTACCTAA CACACAGCAGCAGGTGAAAC
Downstream 100 bases:
>100_bases CCTAGCCCTTGCTTGGCTTGTTGTCGTAATACTGTTTAGCGGATTGTTGATCAAACAATTCGCTTTTTCTTCGTCGGTAC CCATTGAAAGCAACATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSLFKHGRKQISIALLGLASMMASHFAGASENTNAVGSITELQTVLSENSIVRGEFTQTRNMEMFAQPLTSQGTFLLDKS NGLLWTQATPFPVSLVLTDNKLSQRFADQPAKIITDKENPMAFYFSHIFLSVFHGDTQKLQEQFSLSFEPATEKNSDESA NSSSEDTRWTLTLKPKNAPMNAVFEAITLQGKGDIERIELREVRGDSTVIEFSQLSHLPEVLSDAEAQQFQF
Sequences:
>Translated_232_residues MSLFKHGRKQISIALLGLASMMASHFAGASENTNAVGSITELQTVLSENSIVRGEFTQTRNMEMFAQPLTSQGTFLLDKS NGLLWTQATPFPVSLVLTDNKLSQRFADQPAKIITDKENPMAFYFSHIFLSVFHGDTQKLQEQFSLSFEPATEKNSDESA NSSSEDTRWTLTLKPKNAPMNAVFEAITLQGKGDIERIELREVRGDSTVIEFSQLSHLPEVLSDAEAQQFQF >Mature_231_residues SLFKHGRKQISIALLGLASMMASHFAGASENTNAVGSITELQTVLSENSIVRGEFTQTRNMEMFAQPLTSQGTFLLDKSN GLLWTQATPFPVSLVLTDNKLSQRFADQPAKIITDKENPMAFYFSHIFLSVFHGDTQKLQEQFSLSFEPATEKNSDESAN SSSEDTRWTLTLKPKNAPMNAVFEAITLQGKGDIERIELREVRGDSTVIEFSQLSHLPEVLSDAEAQQFQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25829; Mature: 25698
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFKHGRKQISIALLGLASMMASHFAGASENTNAVGSITELQTVLSENSIVRGEFTQTR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCC NMEMFAQPLTSQGTFLLDKSNGLLWTQATPFPVSLVLTDNKLSQRFADQPAKIITDKENP CHHHHHCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCHHHHHHHCCCCEEEECCCCC MAFYFSHIFLSVFHGDTQKLQEQFSLSFEPATEKNSDESANSSSEDTRWTLTLKPKNAPM HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH NAVFEAITLQGKGDIERIELREVRGDSTVIEFSQLSHLPEVLSDAEAQQFQF HHHHHHHEECCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SLFKHGRKQISIALLGLASMMASHFAGASENTNAVGSITELQTVLSENSIVRGEFTQTR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCC NMEMFAQPLTSQGTFLLDKSNGLLWTQATPFPVSLVLTDNKLSQRFADQPAKIITDKENP CHHHHHCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCHHHHHHHCCCCEEEECCCCC MAFYFSHIFLSVFHGDTQKLQEQFSLSFEPATEKNSDESANSSSEDTRWTLTLKPKNAPM HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH NAVFEAITLQGKGDIERIELREVRGDSTVIEFSQLSHLPEVLSDAEAQQFQF HHHHHHHEECCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA