| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708660
Identifier: 218708660
GI number: 218708660
Start: 664764
End: 665492
Strand: Direct
Name: 218708660
Synonym: VS_0638
Alternate gene names: NA
Gene position: 664764-665492 (Clockwise)
Preceding gene: 218708659
Following gene: 218708661
Centisome position: 20.15
GC content: 46.64
Gene sequence:
>729_bases ATGAAATACATCGGAATTGATGGCTGCAAGGCGGGTTGGATCGCTTGGATTGTCTCTGACAGTGAGGTTCCTGAGTTTAA GGTGGTAAACACCCTCGATGAGTTGGTCGATGATCTTACGGGAGCAACAACGTTAATCGATATGCCTATTGGTTTTAGCG ATTCACAGACTCCGGATAGATTATGCGATAAAGCAGCAAGGCGCTTTCTCACCAGTAAGCGTGGCTCTTCCGTATTTCCT GTTCCGTGCCGAGAGGCGGTTTACCAAACCGATTACATTGCAGCGTGCAGTGCCAATGTGGAGCAGCTTGATAAGAAGTT TTCTAAACAGACTTGGGGAATAGTGCCCAAGATCCGCGAGCTTGACGAGCTCATTGAGTCTCACCCCAACCTTTCGATAA GGGAATCACACCCTGAGGTGGTGTTTGCAGCTTTGAAAGACGAACCGCTGACGTTTTCTAAACGAACACAAGAAGGCAAA GAGGAAAGGCTTTCTATTATTCTGCAGCTATCCCCTCAATGGTGTGACCGCTTGTCGTTGGCCATTTCAAATACCAAGCG TAAAGACGCCGCGATAGATGATATTTACGATGCTTTTGTACTGATGTTGATCGCTTATTACGCTCCGCAATTATCGACCT TACCTGAACTTTCTGATGTTGGTGGAGAAGCTGACAAGGATCAGAACGGACGAGTTAGAGAGATTGTCTATTGGAATAAA GCGCGCTAA
Upstream 100 bases:
>100_bases GTTAAGTATCATTGTTGGCATATATACCGGAGTTAAGTTGATTCAAAGTCGATAGTTAGCGACAGTACGAGCTAGTGTAA GTTTGTAATTTGAGAACATA
Downstream 100 bases:
>100_bases CAAAACGTGCCCTCAACTTGGCTTAATATGTTATTTTCTAACTTATGCTATTTTCCAACTTCTGCTACTTTTCACTCTTA CTATTTTTGAGTCTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Nudix Hydrolase
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKYIGIDGCKAGWIAWIVSDSEVPEFKVVNTLDELVDDLTGATTLIDMPIGFSDSQTPDRLCDKAARRFLTSKRGSSVFP VPCREAVYQTDYIAACSANVEQLDKKFSKQTWGIVPKIRELDELIESHPNLSIRESHPEVVFAALKDEPLTFSKRTQEGK EERLSIILQLSPQWCDRLSLAISNTKRKDAAIDDIYDAFVLMLIAYYAPQLSTLPELSDVGGEADKDQNGRVREIVYWNK AR
Sequences:
>Translated_242_residues MKYIGIDGCKAGWIAWIVSDSEVPEFKVVNTLDELVDDLTGATTLIDMPIGFSDSQTPDRLCDKAARRFLTSKRGSSVFP VPCREAVYQTDYIAACSANVEQLDKKFSKQTWGIVPKIRELDELIESHPNLSIRESHPEVVFAALKDEPLTFSKRTQEGK EERLSIILQLSPQWCDRLSLAISNTKRKDAAIDDIYDAFVLMLIAYYAPQLSTLPELSDVGGEADKDQNGRVREIVYWNK AR >Mature_242_residues MKYIGIDGCKAGWIAWIVSDSEVPEFKVVNTLDELVDDLTGATTLIDMPIGFSDSQTPDRLCDKAARRFLTSKRGSSVFP VPCREAVYQTDYIAACSANVEQLDKKFSKQTWGIVPKIRELDELIESHPNLSIRESHPEVVFAALKDEPLTFSKRTQEGK EERLSIILQLSPQWCDRLSLAISNTKRKDAAIDDIYDAFVLMLIAYYAPQLSTLPELSDVGGEADKDQNGRVREIVYWNK AR
Specific function: Unknown
COG id: COG4923
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27263; Mature: 27263
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIGIDGCKAGWIAWIVSDSEVPEFKVVNTLDELVDDLTGATTLIDMPIGFSDSQTPDR CCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH LCDKAARRFLTSKRGSSVFPVPCREAVYQTDYIAACSANVEQLDKKFSKQTWGIVPKIRE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH LDELIESHPNLSIRESHPEVVFAALKDEPLTFSKRTQEGKEERLSIILQLSPQWCDRLSL HHHHHHCCCCCEEECCCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHEEECHHHHHHHHH AISNTKRKDAAIDDIYDAFVLMLIAYYAPQLSTLPELSDVGGEADKDQNGRVREIVYWNK HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECC AR CC >Mature Secondary Structure MKYIGIDGCKAGWIAWIVSDSEVPEFKVVNTLDELVDDLTGATTLIDMPIGFSDSQTPDR CCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHH LCDKAARRFLTSKRGSSVFPVPCREAVYQTDYIAACSANVEQLDKKFSKQTWGIVPKIRE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH LDELIESHPNLSIRESHPEVVFAALKDEPLTFSKRTQEGKEERLSIILQLSPQWCDRLSL HHHHHHCCCCCEEECCCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHEEECHHHHHHHHH AISNTKRKDAAIDDIYDAFVLMLIAYYAPQLSTLPELSDVGGEADKDQNGRVREIVYWNK HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECC AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA