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The map label for this gene is 218708543

Identifier: 218708543

GI number: 218708543

Start: 529403

End: 529753

Strand: Direct

Name: 218708543

Synonym: VS_0509

Alternate gene names: NA

Gene position: 529403-529753 (Clockwise)

Preceding gene: 218708542

Following gene: 218708544

Centisome position: 16.05

GC content: 44.16

Gene sequence:

>351_bases
TTGGCAGTCGTAAGCCAAGTTGAAAAAGGCGAAATGACTTATAAGCAAGCTCAAGAACGTTATGGGATCCAAGGTCGCTC
TACCGTTTTAGTTTGGCTTCGCAAACATGGTCAACTAGATTGGTCTAAAGGAATAGAACAATCGAGAGCGTTAGGAGCGG
CTATGTCAAACTCTTCCTCAACTCAAACCCCAGAGCAACGAATCAAAGAACTCGAGCAGCAATTAGAAGAAACTCAGCTC
AAAGCTGAGTTCTTTGAAGCGGTTGTAAAAGTCATGGATCGAGATTTCGGAGTCCGAATCTCAAAGAAGCGCAGGGCCGA
GTTATTAAGGAAAAAGCGGTCAGAAAGTTGA

Upstream 100 bases:

>100_bases
CCGTCCTAAATATGGTTGACACATTTCCAACATGAAATTGGAGAGTGTCATGAAAACAACAAGTAGACGTACTCAACGAG
ATTATTCTCTTGCCTTTAAA

Downstream 100 bases:

>100_bases
CCGTCACCAAAGCTTGTCACTTCATAGGTATTACACGACAAGCTTTCTACAAGCGCTGTGTTGCAGAAATTCATCAGACA
AAGAAAGATGAATCTGTGCT

Product: ISVisp4 transposase OrfA

Products: NA

Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSNSSSTQTPEQRIKELEQQLEETQL
KAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES

Sequences:

>Translated_116_residues
MAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSNSSSTQTPEQRIKELEQQLEETQL
KAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES
>Mature_115_residues
AVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSNSSSTQTPEQRIKELEQQLEETQLK
AEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13387; Mature: 13256

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSNSSS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
TQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVVSQVEKGEMTYKQAQERYGIQGRSTVLVWLRKHGQLDWSKGIEQSRALGAAMSNSSS
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
TQTPEQRIKELEQQLEETQLKAEFFEAVVKVMDRDFGVRISKKRRAELLRKKRSES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA