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The map label for this gene is yadS [C]

Identifier: 218708501

GI number: 218708501

Start: 481090

End: 481707

Strand: Reverse

Name: yadS [C]

Synonym: VS_0465

Alternate gene names: 218708501

Gene position: 481707-481090 (Counterclockwise)

Preceding gene: 218708502

Following gene: 218708500

Centisome position: 14.6

GC content: 48.54

Gene sequence:

>618_bases
ATGGACTCCATGCTGCTTTATATTATCGATTTATTTGGCACCGCCATCTTTGCCGTCTCAGGCGTATTTGTCGCTGGCCG
TCTTAAGATGGATCCCTTTGGTGTCGCCGTTCTAGGCAGTGTAACCGCGATTGGCGGCGGTACTATTCGTGACATGGCAT
TGGGCGCGACACCGGTGTTTTGGATCACTGATACCACATACCTTTGGGTTATCATCACCACCTGTTTGCTGACCATGATT
ATAGTAAGACGTCCAAAGCGTCTGGCTTGGTGGATATTGCCAGTATGTGATGCGATCGGCTTAGCGGTGTTTGTTGGTAT
TGGTGTAGAAAAAGCACTAATTTATCAAGACTCGGCATTAGTGGCCATTATCATGGGTGTTATCACAGGCTGTGGTGGCG
GTATTATCCGTGACGTACTTGCTCGTGAAGTCCCAATGATCCTAAGAAGTGAAGTCTACGCAACTGCTTGTATCATTGGT
GGTACTTTCCATACCATGGCGCTCAACATGGGACACGACTCAGAAACCGCCTTTTTGGCCGGCGTGTTCACGACACTATT
GATTAGGCTTGGCGCCATTCGCTGGCACTTATCACTGCCGACTTTCGCTATCAAATAG

Upstream 100 bases:

>100_bases
TCGATAGAGCTAGGCAAAATCACTAACTATTTGCAGCGTTTTTTCGTACAATTCGCCACCGACCTGTCCCTATAATTTTA
ACTATAAGAGCACCAGTATC

Downstream 100 bases:

>100_bases
ATAGGACGATGACTAAAAGGCTCCGCAAAGGAGTCTTTTTTAATCCAGCTCACTCTGCAATCCATTCAAATGCTCTCGTG
ACACTTAGCGTTCCCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDSMLLYIIDLFGTAIFAVSGVFVAGRLKMDPFGVAVLGSVTAIGGGTIRDMALGATPVFWITDTTYLWVIITTCLLTMI
IVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALVAIIMGVITGCGGGIIRDVLAREVPMILRSEVYATACIIG
GTFHTMALNMGHDSETAFLAGVFTTLLIRLGAIRWHLSLPTFAIK

Sequences:

>Translated_205_residues
MDSMLLYIIDLFGTAIFAVSGVFVAGRLKMDPFGVAVLGSVTAIGGGTIRDMALGATPVFWITDTTYLWVIITTCLLTMI
IVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALVAIIMGVITGCGGGIIRDVLAREVPMILRSEVYATACIIG
GTFHTMALNMGHDSETAFLAGVFTTLLIRLGAIRWHLSLPTFAIK
>Mature_205_residues
MDSMLLYIIDLFGTAIFAVSGVFVAGRLKMDPFGVAVLGSVTAIGGGTIRDMALGATPVFWITDTTYLWVIITTCLLTMI
IVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSALVAIIMGVITGCGGGIIRDVLAREVPMILRSEVYATACIIG
GTFHTMALNMGHDSETAFLAGVFTTLLIRLGAIRWHLSLPTFAIK

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=203, Percent_Identity=63.5467980295566, Blast_Score=228, Evalue=1e-61,
Organism=Escherichia coli, GI87082304, Length=151, Percent_Identity=38.4105960264901, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22023; Mature: 22023

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSMLLYIIDLFGTAIFAVSGVFVAGRLKMDPFGVAVLGSVTAIGGGTIRDMALGATPVF
CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCCEEE
WITDTTYLWVIITTCLLTMIIVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSAL
EEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHH
VAIIMGVITGCGGGIIRDVLAREVPMILRSEVYATACIIGGTFHTMALNMGHDSETAFLA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHH
GVFTTLLIRLGAIRWHLSLPTFAIK
HHHHHHHHHHHHHEEEEECCCEECC
>Mature Secondary Structure
MDSMLLYIIDLFGTAIFAVSGVFVAGRLKMDPFGVAVLGSVTAIGGGTIRDMALGATPVF
CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCCEEE
WITDTTYLWVIITTCLLTMIIVRRPKRLAWWILPVCDAIGLAVFVGIGVEKALIYQDSAL
EEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHH
VAIIMGVITGCGGGIIRDVLAREVPMILRSEVYATACIIGGTFHTMALNMGHDSETAFLA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHH
GVFTTLLIRLGAIRWHLSLPTFAIK
HHHHHHHHHHHHHEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]