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The map label for this gene is yfcA [H]

Identifier: 218708499

GI number: 218708499

Start: 479311

End: 480090

Strand: Direct

Name: yfcA [H]

Synonym: VS_0463

Alternate gene names: 218708499

Gene position: 479311-480090 (Clockwise)

Preceding gene: 218708498

Following gene: 218708511

Centisome position: 14.53

GC content: 48.46

Gene sequence:

>780_bases
ATGGAAATCACTCTAGAAATATTGGCTATCTTGTTTGTTGTTGCAACAGCAGCAGGCTTTATTGATGCAATGGCTGGCGG
CGGTGGCTTACTGACTCTACCTGCATTGCTAGCGGCTGGAGTTCCACCGACGCAGGCATTGGCAACCAATAAACTCCAAA
GCTCATTTGGCAGCTTCTCTGCGAGTTGGTATTTTGTGCGCAACGGTATCGTCAGCATCAAAGAGATGCGCCTTGCTATC
TTTTGTACCTTTATCGGCTCTGCTATTGGCGCCGAGTTAGTTCAGCACATTGATGCGAGCCTACTGACCAGCGTGATCCC
ACTGCTGCTTATCGCTATCTCTCTCTATTTCCTGTTAGCACCCCAAACTAGAGCGTCTGAAGGAAAACAGAAGATCTCTG
AGGCGATGTTTGCTCTGTGTATTGGTGGCGGCGTGGGTTTCTATGATGGCTTTTTTGGCCCAGGAACAGGTTCTATCTTC
ACCGTCTGCTTTGTTGCGATTGGTCACTTCTCGTTAGTCGATGCCACGGCGCGCACTAAGGTGCTTAACTTCACCTCGAA
TATCGCTGCCTTGATTTTCTTTATTTTGGCTGGCTTGCCTATTTGGGAGTTGGGATTAGTGATGGCGGTCGGTGGATTTA
TGGGCGCTCAGCTTGGCGCTAAAGTGGTGGTGACAAAAGGGCAGAAATGGATTCGCCCTCTTGTGATCGTGATGTCGATG
CTAATGGCGTCTAAACTGCTTTGGGAACAGCATCAACAATGGATTCTATCAGTGTTTTAA

Upstream 100 bases:

>100_bases
TGATGAATATTTGGAATAGGTTAGAATCTTGTGTTTCGTTATTGCTCGTCTGCCGTGAGTGGTAACTTGTCGCTACACAG
GACTTTAAGGCGTTGGGTAT

Downstream 100 bases:

>100_bases
CTCGTGGAGACTGATAGCTATTCGGTCTGACACAGATATGAATCGGCCGAATCAAGCCTGCTAATTCGGTGAAGCTATAC
AGGTATTGAGGCTCAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEITLEILAILFVVATAAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAI
FCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLAPQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIF
TVCFVAIGHFSLVDATARTKVLNFTSNIAALIFFILAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSM
LMASKLLWEQHQQWILSVF

Sequences:

>Translated_259_residues
MEITLEILAILFVVATAAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAI
FCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLAPQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIF
TVCFVAIGHFSLVDATARTKVLNFTSNIAALIFFILAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSM
LMASKLLWEQHQQWILSVF
>Mature_259_residues
MEITLEILAILFVVATAAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSASWYFVRNGIVSIKEMRLAI
FCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLAPQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIF
TVCFVAIGHFSLVDATARTKVLNFTSNIAALIFFILAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSM
LMASKLLWEQHQQWILSVF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=250, Percent_Identity=51.6, Blast_Score=244, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27499; Mature: 27499

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITLEILAILFVVATAAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
ASWYFVRNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLA
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFVAIGHFSLVDATARTK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLNFTSNIAALIFFILAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHH
LMASKLLWEQHQQWILSVF
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEITLEILAILFVVATAAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
ASWYFVRNGIVSIKEMRLAIFCTFIGSAIGAELVQHIDASLLTSVIPLLLIAISLYFLLA
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PQTRASEGKQKISEAMFALCIGGGVGFYDGFFGPGTGSIFTVCFVAIGHFSLVDATARTK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLNFTSNIAALIFFILAGLPIWELGLVMAVGGFMGAQLGAKVVVTKGQKWIRPLVIVMSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHH
LMASKLLWEQHQQWILSVF
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]