Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708446

Identifier: 218708446

GI number: 218708446

Start: 415138

End: 416079

Strand: Direct

Name: 218708446

Synonym: VS_0409

Alternate gene names: NA

Gene position: 415138-416079 (Clockwise)

Preceding gene: 218708445

Following gene: 218708450

Centisome position: 12.58

GC content: 44.48

Gene sequence:

>942_bases
ATGTCACGTATTATGCACGAGCTTAAACAGTCTTCTAATAATAAACCTAGCTTTAAAGGTTACCAAAACCATCACGTGCC
TAGTTCTGCTAAAGGGATTAGCAACAAACGAGGTTCATCGTTAACAATGGGACTGATCCTTGTCTTGGTGCCTTCTCTAT
TGGTGGGCGGCGTTCTGGTTTATCAGTCGTATAATCAACAGCAGCAAGGCTCGGCTAGCCCCGTTGCCTCCGGAGCTCTG
CCTGAATCAAAGCTTCAATCAGACTTTGAGCCTCAAATTGCCGGTTCTGGCATTGCCAGTGTGGATGCAGTGTCAGTGGA
TGCAGGCGATGAAGCATTATTTTCTGTTCGCTCGGCACCGGTAAGCCAGCTTTTGAAAGCACTACCGCGTCAAGAGATAC
ATGCAAAGATGGGCACCGACATCGGTAATATCGCTAGTGACTCAAAAGCGATCGTGGCAAATGTAGATAATAGTAATCAA
GCAGCAACGAATTTAGATCCATTATCTATTGAACCGTCAGTTCAACCTGGAACGAATAATGATAATGTCACGCTGCAATC
GGACCGTGATTTACTGAAAGGGTTAGACCTCACCGAGTTGCCACCCGATTTAGCGTTGAAGCTTGAATCAATGATGGGAG
AGCAGTCGGTTTCATCTGAACCGATGGATTCTAGACCTGTGGGGAATATGGATTCTCAGGTCATCGATTTAGAAACACAT
GGCAATAGATTGTCTGGTGTATTACCTAAGTTAGACTTACAAACTCACATGTACTCGAGTAGCGAAACTAAGCGTTGGGT
AAAAGTGAATGGACATGAAGTTGCTCAAGGGGAATGGATCGAGCGGGGTATTCAGTTGCTTGAGATTAAACCACAATCGG
TAATCATTGAATTCAATCAGCAGAAAATAGAAATCCCAGCTTTGTATGAGTGGAAAGGTTAG

Upstream 100 bases:

>100_bases
CTGTTGATGGCATTGCAGGTAAGCTCACCTTGGCAAGATTGCAGAGATTAGCTCAACTCGATTCGCCTAAGTTGATGTCA
CTAGAAGGGGGCGAAAGCTA

Downstream 100 bases:

>100_bases
TACTATCGATATTACTTACTGTGATTGATGTTAGCGCTGTGACTTGAATGATAAATCCAGACAAATAAAAAGGAGTACCT
CGGTGCTCCTTTTTGATATT

Product: general secretion pathway protein A

Products: NA

Alternate protein names: General Secretion Pathway Protein A; Type II Secretory Pathway Component ExeA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSRIMHELKQSSNNKPSFKGYQNHHVPSSAKGISNKRGSSLTMGLILVLVPSLLVGGVLVYQSYNQQQQGSASPVASGAL
PESKLQSDFEPQIAGSGIASVDAVSVDAGDEALFSVRSAPVSQLLKALPRQEIHAKMGTDIGNIASDSKAIVANVDNSNQ
AATNLDPLSIEPSVQPGTNNDNVTLQSDRDLLKGLDLTELPPDLALKLESMMGEQSVSSEPMDSRPVGNMDSQVIDLETH
GNRLSGVLPKLDLQTHMYSSSETKRWVKVNGHEVAQGEWIERGIQLLEIKPQSVIIEFNQQKIEIPALYEWKG

Sequences:

>Translated_313_residues
MSRIMHELKQSSNNKPSFKGYQNHHVPSSAKGISNKRGSSLTMGLILVLVPSLLVGGVLVYQSYNQQQQGSASPVASGAL
PESKLQSDFEPQIAGSGIASVDAVSVDAGDEALFSVRSAPVSQLLKALPRQEIHAKMGTDIGNIASDSKAIVANVDNSNQ
AATNLDPLSIEPSVQPGTNNDNVTLQSDRDLLKGLDLTELPPDLALKLESMMGEQSVSSEPMDSRPVGNMDSQVIDLETH
GNRLSGVLPKLDLQTHMYSSSETKRWVKVNGHEVAQGEWIERGIQLLEIKPQSVIIEFNQQKIEIPALYEWKG
>Mature_312_residues
SRIMHELKQSSNNKPSFKGYQNHHVPSSAKGISNKRGSSLTMGLILVLVPSLLVGGVLVYQSYNQQQQGSASPVASGALP
ESKLQSDFEPQIAGSGIASVDAVSVDAGDEALFSVRSAPVSQLLKALPRQEIHAKMGTDIGNIASDSKAIVANVDNSNQA
ATNLDPLSIEPSVQPGTNNDNVTLQSDRDLLKGLDLTELPPDLALKLESMMGEQSVSSEPMDSRPVGNMDSQVIDLETHG
NRLSGVLPKLDLQTHMYSSSETKRWVKVNGHEVAQGEWIERGIQLLEIKPQSVIIEFNQQKIEIPALYEWKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33814; Mature: 33682

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIMHELKQSSNNKPSFKGYQNHHVPSSAKGISNKRGSSLTMGLILVLVPSLLVGGVLV
CHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
YQSYNQQQQGSASPVASGALPESKLQSDFEPQIAGSGIASVDAVSVDAGDEALFSVRSAP
ECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCC
VSQLLKALPRQEIHAKMGTDIGNIASDSKAIVANVDNSNQAATNLDPLSIEPSVQPGTNN
HHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DNVTLQSDRDLLKGLDLTELPPDLALKLESMMGEQSVSSEPMDSRPVGNMDSQVIDLETH
CCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCEEEEEECC
GNRLSGVLPKLDLQTHMYSSSETKRWVKVNGHEVAQGEWIERGIQLLEIKPQSVIIEFNQ
CCHHHCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCEEEEECCCEEEEEECC
QKIEIPALYEWKG
CEEECCEEEECCC
>Mature Secondary Structure 
SRIMHELKQSSNNKPSFKGYQNHHVPSSAKGISNKRGSSLTMGLILVLVPSLLVGGVLV
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
YQSYNQQQQGSASPVASGALPESKLQSDFEPQIAGSGIASVDAVSVDAGDEALFSVRSAP
ECCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCC
VSQLLKALPRQEIHAKMGTDIGNIASDSKAIVANVDNSNQAATNLDPLSIEPSVQPGTNN
HHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DNVTLQSDRDLLKGLDLTELPPDLALKLESMMGEQSVSSEPMDSRPVGNMDSQVIDLETH
CCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCEEEEEECC
GNRLSGVLPKLDLQTHMYSSSETKRWVKVNGHEVAQGEWIERGIQLLEIKPQSVIIEFNQ
CCHHHCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCEEEEECCCEEEEEECC
QKIEIPALYEWKG
CEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA