| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ilvI [H]
Identifier: 218708426
GI number: 218708426
Start: 392575
End: 394332
Strand: Direct
Name: ilvI [H]
Synonym: VS_0388
Alternate gene names: 218708426
Gene position: 392575-394332 (Clockwise)
Preceding gene: 218708425
Following gene: 218708427
Centisome position: 11.9
GC content: 44.14
Gene sequence:
>1758_bases ATGACAACAAAACCTGAAACAGCCATGTCATCCGGCGCTGAAATGTTATCCGGCGCTGAGATGGTGGTGCAGTCTCTAAT TGAAGAGGGTGTAGAACAAATCTTTGGTTATCCAGGTGGTTCTGTACTTGATATCTACGATGCGCTGCATGCTAAAACTG CTGAAATTAAACACGTATTAGTACGACACGAACAAGCCGCTACCCACATGGCAGATGGCTATACTCGTTCTACCGGTAAG CCGGGTGTAGTACTTGTGTGTTCTGGTCCAGGTGCGACCAATACCGTTACTGGTATTGCAACAGCCTACATGGACTCAAT CCCAATGATTGTTATTTCTGGTAACGTACCAAATAACCTTATTGGTAACGACGCCTTCCAAGAGTGTGACATCGTTGGTG TATCACGCCCGATCGTTAAACACAGCTTCCTCGTTAAGAAAGCGGAAGATATCCCTGAAGTCGTTAAAAAAGCATTCTAT ATTTCAACGACAGGACGTCCAGGTCCTGTGGTTATTGATCTGCCAAAAGACATTTTAAACCCACAAATTAAGCTTCCTTA TGAATACCCAGAAACGATCAAAATGCGTTCATATAACCCAACGGTTACGGGTCATAAAGGTCAGATCAAAAAGGCGCTAA AAGCTCTTCTTGAAGCGAAGAAGCCGGTACTTTATGTCGGTGGTGGTGCGGTTATTTCTGAGGCAGATAAGCCGCTGTTA AAATTAGCAGAGGCACTGAATTTACCCGTGGTAAGTACCCTAATGGGGCTTGGCGCTTTCCCTGGTACTCATGAGAACTC TTTGGGTATGTTGGGCATGCATGGTTTGTATGAAGCCAATATGGCGATGCACAATGCGGACTTGATCTTTGGTATTGGCG TACGTTTCGATGATCGAACGACCAATAACCTAGATAAATACTGTCCGGATGCGAAGATCATGCACATTGATATCGATCCA TCTTCTATCTCTAAGAACGTTAAAGTGGATCTACCGATTGTAGGTTCAGCGGAAAAAGTACTAGAAAGCATGGTTAACCT GCTTATTGAGCAAGGTGGAACTAACGATGCAGAAGCGATGGAAAGCTGGTGGAGTGAAATTAAACAGTGGCAAGAACGTG ACTGCTTAGCGTATGACAAAACGTCGGGTCGAATTAAGCCACAACAAGTTATTGAAACGCTGCATAAAGTAACCAATGGC GATGCCTATGTTGCTTCTGATGTAGGTCAACACCAAATGTTTGCTGCTTTGTATTACCCGTTTGACAAGCCGCGCCGTTG GATTAACTCTGGTGGTCTAGGTACGATGGGCTTTGGCTTACCAGCTGGTATGGGCGTTAAGTTTGCGAAACCTGATGAAG AAGTTGTGATTGTTACTGGTGACGGCAGTATTCAGATGAATATCCAAGAGCTGTCGACTGCGCTGCAATACAATATCCCC GTTAAGATTATTAATCTTAACAACCGTTTCTTAGGCATGGTAAAACAGTGGCAAGACATTGTTTATCAAGGTCGTTACTC TAATTCATATATGGACTCTGTTCCTGATTTTGCTGCTATCGCTGAGGCTTATGGCCACGTTGGCATGCGTATTTCATCTC CGGATGAATTGGAATCAGGTTTGGAAAAAGCACTAGCGATGAAAGACAGTTTGGTATTTGTCGATATTAGTGTGGATGAC ACCGAGCACGTATACCCAATGCAGATCAAAGGCGAGGGTATGGATAACATGTGGCTAAGCAAAACGGAGAGAACATAA
Upstream 100 bases:
>100_bases GTGGAAGTATTTCGAATTAGGCTACGAATAAGCCCTAGACTATGAAAAACCAGCCCAACATGTTCACCAAATGTGATTGG AAACTGGTGAGGAGAGCAAT
Downstream 100 bases:
>100_bases TATGAGACACATCCTTTCACTATTAATGGAAAACCAACCTGGTGCACTATCTCGTGTGGTTGGCTTGTTTTCTCAGCGTG GCTACAACATCGAGTCTTTG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MTTKPETAMSSGAEMLSGAEMVVQSLIEEGVEQIFGYPGGSVLDIYDALHAKTAEIKHVLVRHEQAATHMADGYTRSTGK PGVVLVCSGPGATNTVTGIATAYMDSIPMIVISGNVPNNLIGNDAFQECDIVGVSRPIVKHSFLVKKAEDIPEVVKKAFY ISTTGRPGPVVIDLPKDILNPQIKLPYEYPETIKMRSYNPTVTGHKGQIKKALKALLEAKKPVLYVGGGAVISEADKPLL KLAEALNLPVVSTLMGLGAFPGTHENSLGMLGMHGLYEANMAMHNADLIFGIGVRFDDRTTNNLDKYCPDAKIMHIDIDP SSISKNVKVDLPIVGSAEKVLESMVNLLIEQGGTNDAEAMESWWSEIKQWQERDCLAYDKTSGRIKPQQVIETLHKVTNG DAYVASDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAGMGVKFAKPDEEVVIVTGDGSIQMNIQELSTALQYNIP VKIINLNNRFLGMVKQWQDIVYQGRYSNSYMDSVPDFAAIAEAYGHVGMRISSPDELESGLEKALAMKDSLVFVDISVDD TEHVYPMQIKGEGMDNMWLSKTERT
Sequences:
>Translated_585_residues MTTKPETAMSSGAEMLSGAEMVVQSLIEEGVEQIFGYPGGSVLDIYDALHAKTAEIKHVLVRHEQAATHMADGYTRSTGK PGVVLVCSGPGATNTVTGIATAYMDSIPMIVISGNVPNNLIGNDAFQECDIVGVSRPIVKHSFLVKKAEDIPEVVKKAFY ISTTGRPGPVVIDLPKDILNPQIKLPYEYPETIKMRSYNPTVTGHKGQIKKALKALLEAKKPVLYVGGGAVISEADKPLL KLAEALNLPVVSTLMGLGAFPGTHENSLGMLGMHGLYEANMAMHNADLIFGIGVRFDDRTTNNLDKYCPDAKIMHIDIDP SSISKNVKVDLPIVGSAEKVLESMVNLLIEQGGTNDAEAMESWWSEIKQWQERDCLAYDKTSGRIKPQQVIETLHKVTNG DAYVASDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAGMGVKFAKPDEEVVIVTGDGSIQMNIQELSTALQYNIP VKIINLNNRFLGMVKQWQDIVYQGRYSNSYMDSVPDFAAIAEAYGHVGMRISSPDELESGLEKALAMKDSLVFVDISVDD TEHVYPMQIKGEGMDNMWLSKTERT >Mature_584_residues TTKPETAMSSGAEMLSGAEMVVQSLIEEGVEQIFGYPGGSVLDIYDALHAKTAEIKHVLVRHEQAATHMADGYTRSTGKP GVVLVCSGPGATNTVTGIATAYMDSIPMIVISGNVPNNLIGNDAFQECDIVGVSRPIVKHSFLVKKAEDIPEVVKKAFYI STTGRPGPVVIDLPKDILNPQIKLPYEYPETIKMRSYNPTVTGHKGQIKKALKALLEAKKPVLYVGGGAVISEADKPLLK LAEALNLPVVSTLMGLGAFPGTHENSLGMLGMHGLYEANMAMHNADLIFGIGVRFDDRTTNNLDKYCPDAKIMHIDIDPS SISKNVKVDLPIVGSAEKVLESMVNLLIEQGGTNDAEAMESWWSEIKQWQERDCLAYDKTSGRIKPQQVIETLHKVTNGD AYVASDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAGMGVKFAKPDEEVVIVTGDGSIQMNIQELSTALQYNIPV KIINLNNRFLGMVKQWQDIVYQGRYSNSYMDSVPDFAAIAEAYGHVGMRISSPDELESGLEKALAMKDSLVFVDISVDDT EHVYPMQIKGEGMDNMWLSKTERT
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=597, Percent_Identity=27.3031825795645, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI21361361, Length=512, Percent_Identity=24.609375, Blast_Score=144, Evalue=3e-34, Organism=Escherichia coli, GI87081685, Length=574, Percent_Identity=70.383275261324, Blast_Score=874, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=562, Percent_Identity=39.3238434163701, Blast_Score=421, Evalue=1e-119, Organism=Escherichia coli, GI1786717, Length=533, Percent_Identity=33.9587242026266, Blast_Score=322, Evalue=4e-89, Organism=Escherichia coli, GI1787096, Length=559, Percent_Identity=28.8014311270125, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI1788716, Length=562, Percent_Identity=25.2669039145907, Blast_Score=185, Evalue=8e-48, Organism=Caenorhabditis elegans, GI17531301, Length=585, Percent_Identity=25.8119658119658, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17531299, Length=585, Percent_Identity=25.8119658119658, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI17542570, Length=589, Percent_Identity=27.6740237691002, Blast_Score=159, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6323755, Length=595, Percent_Identity=41.344537815126, Blast_Score=447, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6320816, Length=547, Percent_Identity=24.1316270566728, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320588, Length=313, Percent_Identity=23.6421725239617, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI19922626, Length=594, Percent_Identity=25.9259259259259, Blast_Score=185, Evalue=7e-47,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63865; Mature: 63734
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKPETAMSSGAEMLSGAEMVVQSLIEEGVEQIFGYPGGSVLDIYDALHAKTAEIKHVL CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VRHEQAATHMADGYTRSTGKPGVVLVCSGPGATNTVTGIATAYMDSIPMIVISGNVPNNL HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC IGNDAFQECDIVGVSRPIVKHSFLVKKAEDIPEVVKKAFYISTTGRPGPVVIDLPKDILN CCCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHHCC PQIKLPYEYPETIKMRSYNPTVTGHKGQIKKALKALLEAKKPVLYVGGGAVISEADKPLL CCEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEECCCCHHHH KLAEALNLPVVSTLMGLGAFPGTHENSLGMLGMHGLYEANMAMHNADLIFGIGVRFDDRT HHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCEEEEEEEEECCCC TNNLDKYCPDAKIMHIDIDPSSISKNVKVDLPIVGSAEKVLESMVNLLIEQGGTNDAEAM CCCHHHHCCCCEEEEEECCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHH ESWWSEIKQWQERDCLAYDKTSGRIKPQQVIETLHKVTNGDAYVASDVGQHQMFAALYYP HHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHEEHHEECC FDKPRRWINSGGLGTMGFGLPAGMGVKFAKPDEEVVIVTGDGSIQMNIQELSTALQYNIP CHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCEEEEHHHHHHHHEECCC VKIINLNNRFLGMVKQWQDIVYQGRYSNSYMDSVPDFAAIAEAYGHVGMRISSPDELESG EEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCCCEEECCHHHHHHH LEKALAMKDSLVFVDISVDDTEHVYPMQIKGEGMDNMWLSKTERT HHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TTKPETAMSSGAEMLSGAEMVVQSLIEEGVEQIFGYPGGSVLDIYDALHAKTAEIKHVL CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VRHEQAATHMADGYTRSTGKPGVVLVCSGPGATNTVTGIATAYMDSIPMIVISGNVPNNL HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC IGNDAFQECDIVGVSRPIVKHSFLVKKAEDIPEVVKKAFYISTTGRPGPVVIDLPKDILN CCCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCHHHCC PQIKLPYEYPETIKMRSYNPTVTGHKGQIKKALKALLEAKKPVLYVGGGAVISEADKPLL CCEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEECCCCHHHH KLAEALNLPVVSTLMGLGAFPGTHENSLGMLGMHGLYEANMAMHNADLIFGIGVRFDDRT HHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCEEEEEEEEECCCC TNNLDKYCPDAKIMHIDIDPSSISKNVKVDLPIVGSAEKVLESMVNLLIEQGGTNDAEAM CCCHHHHCCCCEEEEEECCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHH ESWWSEIKQWQERDCLAYDKTSGRIKPQQVIETLHKVTNGDAYVASDVGQHQMFAALYYP HHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHEEHHEECC FDKPRRWINSGGLGTMGFGLPAGMGVKFAKPDEEVVIVTGDGSIQMNIQELSTALQYNIP CHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCEEEEHHHHHHHHEECCC VKIINLNNRFLGMVKQWQDIVYQGRYSNSYMDSVPDFAAIAEAYGHVGMRISSPDELESG EEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCCCEEECCHHHHHHH LEKALAMKDSLVFVDISVDDTEHVYPMQIKGEGMDNMWLSKTERT HHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]