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The map label for this gene is yhdE [C]

Identifier: 218708384

GI number: 218708384

Start: 339270

End: 339902

Strand: Direct

Name: yhdE [C]

Synonym: VS_0344

Alternate gene names: 218708384

Gene position: 339270-339902 (Clockwise)

Preceding gene: 218708383

Following gene: 218708385

Centisome position: 10.28

GC content: 43.29

Gene sequence:

>633_bases
ATGGAAAAGAAACATTTAGTTTTGGCATCCGGCTCTCCACGCCGCAAAGAATTGCTATCTCAACTCGGTTATGAGTTTTC
TGTCCTTGTAACTGATGTCGAAGAGTGTAAACACGCTCAAGAAACCGCCGAAGAGTACGTTAAGCGACTATCTTTAGATA
AAGCCTTAGCTGCGTTGTCTTTATTGAAAGATAACCCTTCTGAAAAACAGCATGTTGCTTCTGGTTCTGATACTGTAGTT
GCTAGTTATCTTGATTCTGAAACAGTGGTTCTGGGCTCTGACACAGTCGTCGTAAGCCAAGGGCAAGTGCTCGAGAAGCC
AATAGACCTTGCTGACTCTAAGCGTATGCTTACTCAGTTAGCGAATGAACGTCACCAAGTGATGACAGCAGTGTCTGTTG
TATCAGAAGAAAAACAAAAGACAGAAATCATTATTACCGACGTATGGTTTAAACCCCTCAGTGAAAAAGAAATAGAACAA
TACTGGCAAACAGGGGAGCCATGCGATAAAGCCGGTAGCTATGGGATCCAAGGTTTGGGCGGACGCTTTGTTACCCGAAT
CGAAGGTAGTTATTACGCCGTTGTCGGCTTACCTTTATTTGAAACGGACCAGCTACTGCAAGAATTCTTATAA

Upstream 100 bases:

>100_bases
TTATCGCTATGGAGCGCATTGATAAACTGTATACTTTGGCCTTGGATGTTTTTATTAATGAGACGTGTACGTCGCCATTG
GCATGTAAGGTAGAGTGACG

Downstream 100 bases:

>100_bases
TTACTAATCTGAGGTGCACCATGAGTGCTGAATTGTTGCTGAACGTGACCCCGAGTGAGACTCGTGTGGCCATGATTGAA
GGGGGAGCTCTTCAAGAGAT

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEKKHLVLASGSPRRKELLSQLGYEFSVLVTDVEECKHAQETAEEYVKRLSLDKALAALSLLKDNPSEKQHVASGSDTVV
ASYLDSETVVLGSDTVVVSQGQVLEKPIDLADSKRMLTQLANERHQVMTAVSVVSEEKQKTEIIITDVWFKPLSEKEIEQ
YWQTGEPCDKAGSYGIQGLGGRFVTRIEGSYYAVVGLPLFETDQLLQEFL

Sequences:

>Translated_210_residues
MEKKHLVLASGSPRRKELLSQLGYEFSVLVTDVEECKHAQETAEEYVKRLSLDKALAALSLLKDNPSEKQHVASGSDTVV
ASYLDSETVVLGSDTVVVSQGQVLEKPIDLADSKRMLTQLANERHQVMTAVSVVSEEKQKTEIIITDVWFKPLSEKEIEQ
YWQTGEPCDKAGSYGIQGLGGRFVTRIEGSYYAVVGLPLFETDQLLQEFL
>Mature_210_residues
MEKKHLVLASGSPRRKELLSQLGYEFSVLVTDVEECKHAQETAEEYVKRLSLDKALAALSLLKDNPSEKQHVASGSDTVV
ASYLDSETVVLGSDTVVVSQGQVLEKPIDLADSKRMLTQLANERHQVMTAVSVVSEEKQKTEIIITDVWFKPLSEKEIEQ
YWQTGEPCDKAGSYGIQGLGGRFVTRIEGSYYAVVGLPLFETDQLLQEFL

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=204, Percent_Identity=36.2745098039216, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI291045181, Length=124, Percent_Identity=41.1290322580645, Blast_Score=98, Evalue=4e-21,
Organism=Homo sapiens, GI310133124, Length=124, Percent_Identity=41.1290322580645, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI291045183, Length=204, Percent_Identity=35.2941176470588, Blast_Score=97, Evalue=7e-21,
Organism=Escherichia coli, GI1789646, Length=205, Percent_Identity=46.3414634146341, Blast_Score=175, Evalue=2e-45,
Organism=Escherichia coli, GI87081830, Length=205, Percent_Identity=28.2926829268293, Blast_Score=77, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI193202443, Length=209, Percent_Identity=33.9712918660287, Blast_Score=100, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6324685, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=9e-14,
Organism=Drosophila melanogaster, GI78706856, Length=196, Percent_Identity=33.6734693877551, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 23352; Mature: 23352

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKHLVLASGSPRRKELLSQLGYEFSVLVTDVEECKHAQETAEEYVKRLSLDKALAALS
CCCCEEEEECCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKDNPSEKQHVASGSDTVVASYLDSETVVLGSDTVVVSQGQVLEKPIDLADSKRMLTQL
HHHCCCCHHHHHCCCCCEEEEEECCCCEEEECCCEEEECCCHHHHCCCCCCHHHHHHHHH
ANERHQVMTAVSVVSEEKQKTEIIITDVWFKPLSEKEIEQYWQTGEPCDKAGSYGIQGLG
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
GRFVTRIEGSYYAVVGLPLFETDQLLQEFL
CEEEEEECCCEEEEEECCCCCHHHHHHHHC
>Mature Secondary Structure
MEKKHLVLASGSPRRKELLSQLGYEFSVLVTDVEECKHAQETAEEYVKRLSLDKALAALS
CCCCEEEEECCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKDNPSEKQHVASGSDTVVASYLDSETVVLGSDTVVVSQGQVLEKPIDLADSKRMLTQL
HHHCCCCHHHHHCCCCCEEEEEECCCCEEEECCCEEEECCCHHHHCCCCCCHHHHHHHHH
ANERHQVMTAVSVVSEEKQKTEIIITDVWFKPLSEKEIEQYWQTGEPCDKAGSYGIQGLG
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCC
GRFVTRIEGSYYAVVGLPLFETDQLLQEFL
CEEEEEECCCEEEEEECCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]