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The map label for this gene is 218708377

Identifier: 218708377

GI number: 218708377

Start: 330702

End: 331256

Strand: Direct

Name: 218708377

Synonym: VS_0337

Alternate gene names: NA

Gene position: 330702-331256 (Clockwise)

Preceding gene: 218708376

Following gene: 218708378

Centisome position: 10.02

GC content: 45.05

Gene sequence:

>555_bases
GTGCTCATGAACACCATTCATAGATCACCTGCAAAAGAACGTGGTTTCACATTAATTGAAAGTGTCGTTGTGATCGTGGT
TATGGGGCTTGCCATGATGACCATCATAAATTTTTTAGCACCTCAGATTAGCCGATCTGTTGATCCTAATTATCAAACCC
GTTCAGCCGCGTTAGGGCAGAGTGTGATGTCTATGATTCTTGCTCGAGGGTTCGATGAGAATAGCGACTTTGATGGCGGA
GAACTTAGGTGCGGTGAGGGAGCTGCTGCCGGTGTTAATTGCACTGCTGAGGCTAACTTTGGCCCAGAAGAGGCTGATAT
TGCTCTATACAATGATGTCGATGACTATGATGGGTGTTGGGAACCCGGTGCAACTAACGGGTGTCGAGACCTTAATCTAT
TATTGGGTGAAAATGGCGCAACAACCTACAGAAACTACCGCCTAGATGTTGATGTGACGTACCAAATGGTCGATCAACTA
AAAAGAATTAACCTAACGATCTCGGTCTCAAATTATCCTCCTATCGTGCTGGATGCCTATCGAGGGAATTATTAA

Upstream 100 bases:

>100_bases
TTGTCGTTGACGTTGCAGCCGGTGTGGTGATTACTATCACTTCAAATGTGAACACCTGCCGTGTGGATATTAACTCGCAA
GGTTATGTCGAAAATGGGGT

Downstream 100 bases:

>100_bases
TGAAAAGGCAAGGTTTCACTCTTATTGAAATGATTATCACCATGATTGTTGGTAGCATTTTAGTTGTAGGCATTGCTGGG
TTTGTTGAGTTAGGTGCGCG

Product: MSHA pilin protein MshD

Products: NA

Alternate protein names: Methylation Site Containing Protein; MshD Protein; Msha Pilin Protein Mshd; Mannose-Sensitive Agglutinin; Pilin Protein; Fused MSHA Biogenesis Proteins MshN And MshD; Prepilin-Type Cleavage/Methylation-Like; Type IV Pilus Prepilin-Like Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLMNTIHRSPAKERGFTLIESVVVIVVMGLAMMTIINFLAPQISRSVDPNYQTRSAALGQSVMSMILARGFDENSDFDGG
ELRCGEGAAAGVNCTAEANFGPEEADIALYNDVDDYDGCWEPGATNGCRDLNLLLGENGATTYRNYRLDVDVTYQMVDQL
KRINLTISVSNYPPIVLDAYRGNY

Sequences:

>Translated_184_residues
MLMNTIHRSPAKERGFTLIESVVVIVVMGLAMMTIINFLAPQISRSVDPNYQTRSAALGQSVMSMILARGFDENSDFDGG
ELRCGEGAAAGVNCTAEANFGPEEADIALYNDVDDYDGCWEPGATNGCRDLNLLLGENGATTYRNYRLDVDVTYQMVDQL
KRINLTISVSNYPPIVLDAYRGNY
>Mature_184_residues
MLMNTIHRSPAKERGFTLIESVVVIVVMGLAMMTIINFLAPQISRSVDPNYQTRSAALGQSVMSMILARGFDENSDFDGG
ELRCGEGAAAGVNCTAEANFGPEEADIALYNDVDDYDGCWEPGATNGCRDLNLLLGENGATTYRNYRLDVDVTYQMVDQL
KRINLTISVSNYPPIVLDAYRGNY

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20178; Mature: 20178

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMNTIHRSPAKERGFTLIESVVVIVVMGLAMMTIINFLAPQISRSVDPNYQTRSAALGQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SVMSMILARGFDENSDFDGGELRCGEGAAAGVNCTAEANFGPEEADIALYNDVDDYDGCW
HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCC
EPGATNGCRDLNLLLGENGATTYRNYRLDVDVTYQMVDQLKRINLTISVSNYPPIVLDAY
CCCCCCCCCEEEEEECCCCCCEEEEEEEEEEHHHHHHHHHHHEEEEEEECCCCCEEEECC
RGNY
CCCC
>Mature Secondary Structure
MLMNTIHRSPAKERGFTLIESVVVIVVMGLAMMTIINFLAPQISRSVDPNYQTRSAALGQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SVMSMILARGFDENSDFDGGELRCGEGAAAGVNCTAEANFGPEEADIALYNDVDDYDGCW
HHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCC
EPGATNGCRDLNLLLGENGATTYRNYRLDVDVTYQMVDQLKRINLTISVSNYPPIVLDAY
CCCCCCCCCEEEEEECCCCCCEEEEEEEEEEHHHHHHHHHHHEEEEEEECCCCCEEEECC
RGNY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA