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The map label for this gene is 218708376

Identifier: 218708376

GI number: 218708376

Start: 330160

End: 330711

Strand: Direct

Name: 218708376

Synonym: VS_0336

Alternate gene names: NA

Gene position: 330160-330711 (Clockwise)

Preceding gene: 218708375

Following gene: 218708377

Centisome position: 10.01

GC content: 47.28

Gene sequence:

>552_bases
GTGAATCAATTCAATAGAACATACAGAAACATCGGGTTTCAGCAACAAGGTTTTACTTTAGTCGAGCTAATCATTGTGAT
CTTGTTGATCGCGATTGTCTCTGCCTACGCTGCTAGCCGTTTTTCCGGAAGGGATAGTTTTTCTGCCTTTGCTGCTCAAG
AGCAAGTAACTTCTGTTGTCCGCCAAGTTCAAGTGAATCGTATGCAGTCCAATGTGGACCTTGGGGCCGTCGTTGGAGAG
AGCAGTTTTATTCTCGCTATCGTTGGAAATTGTATCGGTTCCGAAGTGAGCTGTACCGCGCAAAACCAAGCGCGTAGTGA
TTGGGTTATGCTCGACGGGGTCACCTTAACGGCGGCATCGAATACCGCACCTGCCAGTCCCCTATCTCTAGTTAACTTTG
ATTTATTAGGCAACCCTACAACAGGTGAAACACCTGCAGGCGTTGTCGTTGACGTTGCAGCCGGTGTGGTGATTACTATC
ACTTCAAATGTGAACACCTGCCGTGTGGATATTAACTCGCAAGGTTATGTCGAAAATGGGGTGTGCTCATGA

Upstream 100 bases:

>100_bases
TTTTTTCTATCTGAAATTCAGCTAAGCAACAAAGACAACTTCCTTTCCCTGAGTTACACTTAATCTTCAAACTATCAAAT
ATTTAGCGGATTGGATTTCG

Downstream 100 bases:

>100_bases
ACACCATTCATAGATCACCTGCAAAAGAACGTGGTTTCACATTAATTGAAAGTGTCGTTGTGATCGTGGTTATGGGGCTT
GCCATGATGACCATCATAAA

Product: MSHA pilin protein MshC

Products: NA

Alternate protein names: Msha Pilin Protein Mshc

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNQFNRTYRNIGFQQQGFTLVELIIVILLIAIVSAYAASRFSGRDSFSAFAAQEQVTSVVRQVQVNRMQSNVDLGAVVGE
SSFILAIVGNCIGSEVSCTAQNQARSDWVMLDGVTLTAASNTAPASPLSLVNFDLLGNPTTGETPAGVVVDVAAGVVITI
TSNVNTCRVDINSQGYVENGVCS

Sequences:

>Translated_183_residues
MNQFNRTYRNIGFQQQGFTLVELIIVILLIAIVSAYAASRFSGRDSFSAFAAQEQVTSVVRQVQVNRMQSNVDLGAVVGE
SSFILAIVGNCIGSEVSCTAQNQARSDWVMLDGVTLTAASNTAPASPLSLVNFDLLGNPTTGETPAGVVVDVAAGVVITI
TSNVNTCRVDINSQGYVENGVCS
>Mature_183_residues
MNQFNRTYRNIGFQQQGFTLVELIIVILLIAIVSAYAASRFSGRDSFSAFAAQEQVTSVVRQVQVNRMQSNVDLGAVVGE
SSFILAIVGNCIGSEVSCTAQNQARSDWVMLDGVTLTAASNTAPASPLSLVNFDLLGNPTTGETPAGVVVDVAAGVVITI
TSNVNTCRVDINSQGYVENGVCS

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19284; Mature: 19284

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFNRTYRNIGFQQQGFTLVELIIVILLIAIVSAYAASRFSGRDSFSAFAAQEQVTSVV
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RQVQVNRMQSNVDLGAVVGESSFILAIVGNCIGSEVSCTAQNQARSDWVMLDGVTLTAAS
HHHHHHHHHCCCCEEEEECCCCEEEEEHHHHCCCCEEEEECCCCCCCEEEECCEEEEECC
NTAPASPLSLVNFDLLGNPTTGETPAGVVVDVAAGVVITITSNVNTCRVDINSQGYVENG
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCCCCCC
VCS
CCC
>Mature Secondary Structure
MNQFNRTYRNIGFQQQGFTLVELIIVILLIAIVSAYAASRFSGRDSFSAFAAQEQVTSVV
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RQVQVNRMQSNVDLGAVVGESSFILAIVGNCIGSEVSCTAQNQARSDWVMLDGVTLTAAS
HHHHHHHHHCCCCEEEEECCCCEEEEEHHHHCCCCEEEEECCCCCCCEEEECCEEEEECC
NTAPASPLSLVNFDLLGNPTTGETPAGVVVDVAAGVVITITSNVNTCRVDINSQGYVENG
CCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCCCCCC
VCS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA