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The map label for this gene is 218708367

Identifier: 218708367

GI number: 218708367

Start: 321277

End: 321609

Strand: Direct

Name: 218708367

Synonym: VS_0327

Alternate gene names: NA

Gene position: 321277-321609 (Clockwise)

Preceding gene: 218708366

Following gene: 218708368

Centisome position: 9.74

GC content: 43.24

Gene sequence:

>333_bases
GTGGTTAGAACTCTAGTGTTATCTTTGCTGTTTGGTAGTTCAGTGGTATGGGCAGAACAAGACCCAACTGCGCCATTAGG
TTGGCTTTCGCCCCTGCAGAAATCAGCATCAGCTAAAAAGGCGCCAGTTCAATATCGTTTACCGTCTCTAGAGAGCATTG
TTTGCAAGGGCGATACACCTTGTTATGCGATTATGAATGGTCAGATTCTCGAACAAGGAGAAACGATCAGAGGGTACCGA
GTTAAGAACATTGATCCAGAGTACGTCACTCTGCAGAGAAGCTCTAAGCAGTGGAAATTAGAGATGTTCTCTTTAGATGT
TAAGAATAATTAA

Upstream 100 bases:

>100_bases
AGCTATTATTGGCGCACGTTTGAGTATTCAGTAGAAGAATATCCCAAAGCTCGACTTGTGTTCGAGGTTTACACCCTAGG
TACCAGACAGGAGTTTATCG

Downstream 100 bases:

>100_bases
GGTTAGAGTGAAGACATGCGTAAACTTGTAGTAGCAATTCTAGTGTCATCTTTAGTCGGCTGTTCGATGGGGCATAGAGA
CCCTGTTGAGATAAAAGAGT

Product: MSHA biogenesis protein MshK

Products: NA

Alternate protein names: Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVRTLVLSLLFGSSVVWAEQDPTAPLGWLSPLQKSASAKKAPVQYRLPSLESIVCKGDTPCYAIMNGQILEQGETIRGYR
VKNIDPEYVTLQRSSKQWKLEMFSLDVKNN

Sequences:

>Translated_110_residues
MVRTLVLSLLFGSSVVWAEQDPTAPLGWLSPLQKSASAKKAPVQYRLPSLESIVCKGDTPCYAIMNGQILEQGETIRGYR
VKNIDPEYVTLQRSSKQWKLEMFSLDVKNN
>Mature_110_residues
MVRTLVLSLLFGSSVVWAEQDPTAPLGWLSPLQKSASAKKAPVQYRLPSLESIVCKGDTPCYAIMNGQILEQGETIRGYR
VKNIDPEYVTLQRSSKQWKLEMFSLDVKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12359; Mature: 12359

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRTLVLSLLFGSSVVWAEQDPTAPLGWLSPLQKSASAKKAPVQYRLPSLESIVCKGDTP
CHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCC
CYAIMNGQILEQGETIRGYRVKNIDPEYVTLQRSSKQWKLEMFSLDVKNN
EEEEECCEEECCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MVRTLVLSLLFGSSVVWAEQDPTAPLGWLSPLQKSASAKKAPVQYRLPSLESIVCKGDTP
CHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCC
CYAIMNGQILEQGETIRGYRVKNIDPEYVTLQRSSKQWKLEMFSLDVKNN
EEEEECCEEECCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA