| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is yjeT [C]
Identifier: 218708327
GI number: 218708327
Start: 267122
End: 267361
Strand: Reverse
Name: yjeT [C]
Synonym: VS_0274
Alternate gene names: 218708327
Gene position: 267361-267122 (Counterclockwise)
Preceding gene: 218708330
Following gene: 218708318
Centisome position: 8.1
GC content: 49.58
Gene sequence:
>240_bases ATGTGTAAAGATACTGATATCATTGCTTTTTTACAGACAAAAGGCAGAACCATGTCTCAATCAATTTGGCTCGCTATTGG GCTCGTTCTTATCGTTGAAGGGCTCGGCCCCTTGATTGCACCCAATGGCTGGAGAAACATGGTCGCGCAACTGAGCGAGC AACCAGACACGCAACTGCGCCGTATTGGCGGTTGTCTTGTGGTGGCTGGTGCCGTTATCGCTTTCATGACCTACCGTTAG
Upstream 100 bases:
>100_bases TTAAAAATGGATTCTAGCACTGAATCACACTTCTTGCAGTCACTTTTTGTTCATAAACGTTAACGCTGTACAAAAATAAA CCACTCATAACTGGGGGCAG
Downstream 100 bases:
>100_bases GTTTTCTCAAAGTACGGAGCTGTCACTACGACTTCCCTCAAAGATTCAATAGTCAACCTGCAGTCTTCAACGAATAGAAA ACAAAAAGGCTCCCATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MCKDTDIIAFLQTKGRTMSQSIWLAIGLVLIVEGLGPLIAPNGWRNMVAQLSEQPDTQLRRIGGCLVVAGAVIAFMTYR
Sequences:
>Translated_79_residues MCKDTDIIAFLQTKGRTMSQSIWLAIGLVLIVEGLGPLIAPNGWRNMVAQLSEQPDTQLRRIGGCLVVAGAVIAFMTYR >Mature_79_residues MCKDTDIIAFLQTKGRTMSQSIWLAIGLVLIVEGLGPLIAPNGWRNMVAQLSEQPDTQLRRIGGCLVVAGAVIAFMTYR
Specific function: Unknown
COG id: COG3242
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8619; Mature: 8619
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKDTDIIAFLQTKGRTMSQSIWLAIGLVLIVEGLGPLIAPNGWRNMVAQLSEQPDTQLR CCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHH RIGGCLVVAGAVIAFMTYR HHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MCKDTDIIAFLQTKGRTMSQSIWLAIGLVLIVEGLGPLIAPNGWRNMVAQLSEQPDTQLR CCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHH RIGGCLVVAGAVIAFMTYR HHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA