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The map label for this gene is rfbG [H]

Identifier: 218708293

GI number: 218708293

Start: 225132

End: 226067

Strand: Direct

Name: rfbG [H]

Synonym: VS_0231

Alternate gene names: 218708293

Gene position: 225132-226067 (Clockwise)

Preceding gene: 218708292

Following gene: 218708294

Centisome position: 6.82

GC content: 35.36

Gene sequence:

>936_bases
GTGAAGTATAGTAAACCACAAGTTGCGGTGTTGTTAGCTGCATATAATGGAGAACAGTATATTGCTGAGCAAATTGATAC
AATAATAGCTCAGAAGGAAGTACAAGTTTCTATTATAATTAGCGTAGATAAGAGCTCAGACCGTACACTAATTATTGCAC
AAGAGTATGAGGTTAAATATCCTGGCATTGTAACTGTTTTACCTTATGGTAATAAATATGGTTCTGCAGGTCAAAATTTT
GCACGTTTATTACTAGATGTCGATTTTTCTAATTATCAATATATATCATTTGCCGATCAAGATGATATATGGCTTCCTGG
TAAACTACAACGTGCTGTTGCTGAACTCGAATCGAAATGTGCAGATGCATATTCTTCAAATGTTACGGCATTCTGGGAGA
CAGGGAGAGAAGTATTAGTAAAGAAGAACTACAAACAAGTTGAATTTGATTACTTGTTCGAATCACCAGGCCCAGGGTGT
ACCTTTCTATTTAGTCAACATTTAGTTATAGCATTACAAAAGCACTTAATATCTAAAAAGAGTGAACTTGAACAGTTGTG
GATGCATGACTGGTATTGTTATTCTTTTGCTCGTTTTAATGAGTTTAAATGGTATATTGATAGTGCTCCACTTATGAGGT
ATAGGCAGCATGGGGGTAATGAAGTTGGAGCTAACGAAGGTTGGTTGAGCTTTAAGAATCGCTTTAAAATTATCTTGAGC
GGAAGTGGTTTTTCAAAAGTACTAACTCAAGCCTACTTCATAGGGCAGTCGGAATTAGAGCCCATTAAACTAATAGAAAA
CAGAAGCAGATTTTCAATGTGTAGGTTATTATTTATTACTTGGAAATGTCGTCGTCAACTTTCGCATAAAGCTATGCTAT
CAGTGGCATGCTTATTATTTATTATTATAGGTTTCTCTCATCGTAAGCCAGAATAA

Upstream 100 bases:

>100_bases
GCGAAAGCAGTTATCAGAAATGTTGGACAGTTTGTAATTATATAGTTGCTGTATATTCTAAAGCATGAGATAGAAATACT
ATTCTAGTATAGGAGGGTAT

Downstream 100 bases:

>100_bases
ACGAGTACTAATTACAGGTGGCAGTGGGTTCATTGGTGGTAATGTTTTATCTTTATTATCAACGAAATACTGTGTGATTT
TTCAGCATCGTAAAAACATT

Product: putative dTDP-rhamnosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKYSKPQVAVLLAAYNGEQYIAEQIDTIIAQKEVQVSIIISVDKSSDRTLIIAQEYEVKYPGIVTVLPYGNKYGSAGQNF
ARLLLDVDFSNYQYISFADQDDIWLPGKLQRAVAELESKCADAYSSNVTAFWETGREVLVKKNYKQVEFDYLFESPGPGC
TFLFSQHLVIALQKHLISKKSELEQLWMHDWYCYSFARFNEFKWYIDSAPLMRYRQHGGNEVGANEGWLSFKNRFKIILS
GSGFSKVLTQAYFIGQSELEPIKLIENRSRFSMCRLLFITWKCRRQLSHKAMLSVACLLFIIIGFSHRKPE

Sequences:

>Translated_311_residues
MKYSKPQVAVLLAAYNGEQYIAEQIDTIIAQKEVQVSIIISVDKSSDRTLIIAQEYEVKYPGIVTVLPYGNKYGSAGQNF
ARLLLDVDFSNYQYISFADQDDIWLPGKLQRAVAELESKCADAYSSNVTAFWETGREVLVKKNYKQVEFDYLFESPGPGC
TFLFSQHLVIALQKHLISKKSELEQLWMHDWYCYSFARFNEFKWYIDSAPLMRYRQHGGNEVGANEGWLSFKNRFKIILS
GSGFSKVLTQAYFIGQSELEPIKLIENRSRFSMCRLLFITWKCRRQLSHKAMLSVACLLFIIIGFSHRKPE
>Mature_311_residues
MKYSKPQVAVLLAAYNGEQYIAEQIDTIIAQKEVQVSIIISVDKSSDRTLIIAQEYEVKYPGIVTVLPYGNKYGSAGQNF
ARLLLDVDFSNYQYISFADQDDIWLPGKLQRAVAELESKCADAYSSNVTAFWETGREVLVKKNYKQVEFDYLFESPGPGC
TFLFSQHLVIALQKHLISKKSELEQLWMHDWYCYSFARFNEFKWYIDSAPLMRYRQHGGNEVGANEGWLSFKNRFKIILS
GSGFSKVLTQAYFIGQSELEPIKLIENRSRFSMCRLLFITWKCRRQLSHKAMLSVACLLFIIIGFSHRKPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35913; Mature: 35913

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSKPQVAVLLAAYNGEQYIAEQIDTIIAQKEVQVSIIISVDKSSDRTLIIAQEYEVKY
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECEECC
PGIVTVLPYGNKYGSAGQNFARLLLDVDFSNYQYISFADQDDIWLPGKLQRAVAELESKC
CCEEEEEECCCCCCCCHHHHEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ADAYSSNVTAFWETGREVLVKKNYKQVEFDYLFESPGPGCTFLFSQHLVIALQKHLISKK
HHHHCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHH
SELEQLWMHDWYCYSFARFNEFKWYIDSAPLMRYRQHGGNEVGANEGWLSFKNRFKIILS
HHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCEEEECCEEEEEEE
GSGFSKVLTQAYFIGQSELEPIKLIENRSRFSMCRLLFITWKCRRQLSHKAMLSVACLLF
CCCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIIGFSHRKPE
HHHCCCCCCCC
>Mature Secondary Structure
MKYSKPQVAVLLAAYNGEQYIAEQIDTIIAQKEVQVSIIISVDKSSDRTLIIAQEYEVKY
CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECEECC
PGIVTVLPYGNKYGSAGQNFARLLLDVDFSNYQYISFADQDDIWLPGKLQRAVAELESKC
CCEEEEEECCCCCCCCHHHHEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ADAYSSNVTAFWETGREVLVKKNYKQVEFDYLFESPGPGCTFLFSQHLVIALQKHLISKK
HHHHCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHH
SELEQLWMHDWYCYSFARFNEFKWYIDSAPLMRYRQHGGNEVGANEGWLSFKNRFKIILS
HHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCCCCCCEEEECCEEEEEEE
GSGFSKVLTQAYFIGQSELEPIKLIENRSRFSMCRLLFITWKCRRQLSHKAMLSVACLLF
CCCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIIGFSHRKPE
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]