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The map label for this gene is yibP [H]

Identifier: 218708266

GI number: 218708266

Start: 196629

End: 197804

Strand: Reverse

Name: yibP [H]

Synonym: VS_0203

Alternate gene names: 218708266

Gene position: 197804-196629 (Counterclockwise)

Preceding gene: 218708267

Following gene: 218708264

Centisome position: 6.0

GC content: 43.28

Gene sequence:

>1176_bases
ATGCTGAAAACTAATAAGAGCAACATGACGATAATGATGAAACCAGTCCAAGTAATTAGCACTGTTCTTTTGATATCTTC
CAGCCTTTGCGCTGTTCTTTTCTCTGCATCGCCACTTGCCGCATCGAAAGGGGAGCTGAAAGGTGTGTCGAGTGAGATAT
CTCGTCAACAAAAAACACTAACCTCACAACAGAAGAAGCTCGACAATTTACAAGCAAACCTCAAGCAACAAGAGCTCTCT
ATCTCCTTGCTTGAAAAAGCCATTAAAACAAGTAAGAAACAACTCAATACCGCCAATGCTAATGTTGCTAGCTTAGATAA
TAAGATTAAAGCGCTTACAGCACAGAAAAAAGCCCAAACCGATAAGTTAGAGCAGCTGATTCAGACTTACTACATGACCA
GCAGAGCCAAAGCCTCTTCTCACATCTTAAATACTGGCGTTGAAGAAGACCGCATTAGTCACTATTACCAACACCTCGCC
AAAGCGCGATCTGCAACAATCAAAACGATCGAACAAACTCAACTTGAATTAGAAGAAAGCCATAAGCAACGCCTACTTGA
GCAAGAACAAATAGCAACGCTGTTAAATCAACAGGTAGCAAAGCGCAACAAACTATCGCAGACCCAAACACAGCGTAAAA
AGACCGTCGGCAGTATTAAGAAAAACATCTCTGGCGACAAAAATTACTTAGCCGAACTTCAACGTAATGAAACTCGCCTA
AAAGCCGAAATAGCGAAAGCAGAAAAAGCCGCACGAGAGAGACGCAATGCTGTCCCTATGGATGGCTTAGCCAAACGTAA
AGGTAAACTGCCTTGGCCAATCAAAGATAAAGTTCTGCATAACTACGGATCACGCCAAACTGGCCAAGTAAATTGGAAAG
GCATGGTGATCAAAGCGAAATACGGTCAGCAGGTAAAATCTGTTTACTCAGGAACCGTCGTATTCGCCGAATATTTGCGT
GGTTATGGTTTAGTGGTACTGCTGGACCACGGTAAAGGCGACATGACACTGTATGGCTTTAACCAAGCGCTTTTAAAGAA
AGAAGGTGACAAGGTTAAAGCGGGTGAGGCGATAGCTCTCGCCGGTGACACTGGTGGACAAACCCGACCATCGCTGTACT
TTGAAATTCGTAGAAACAGCCAAGCTCAAAATCCGAAAAGATGGTTAGTTAGGTAA

Upstream 100 bases:

>100_bases
CAAGGCTTCAATGGTCGCTCGCAAAATTTCATTCATGGTGATGGAATATAAGAGCTGATTGTAGGTTCGATGAGCCGAGA
TACGAAAGACTTAAGAGCAG

Downstream 100 bases:

>100_bases
AACAGATACGAGATATAAGTAACCGAGATGCGAAGAGCAAGCTTAAAGAGCTGAAAATCTCTGAATTCGCATTTATCAAA
CTCAGTCATTCCAGAATTGA

Product: putative peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLKTNKSNMTIMMKPVQVISTVLLISSSLCAVLFSASPLAASKGELKGVSSEISRQQKTLTSQQKKLDNLQANLKQQELS
ISLLEKAIKTSKKQLNTANANVASLDNKIKALTAQKKAQTDKLEQLIQTYYMTSRAKASSHILNTGVEEDRISHYYQHLA
KARSATIKTIEQTQLELEESHKQRLLEQEQIATLLNQQVAKRNKLSQTQTQRKKTVGSIKKNISGDKNYLAELQRNETRL
KAEIAKAEKAARERRNAVPMDGLAKRKGKLPWPIKDKVLHNYGSRQTGQVNWKGMVIKAKYGQQVKSVYSGTVVFAEYLR
GYGLVVLLDHGKGDMTLYGFNQALLKKEGDKVKAGEAIALAGDTGGQTRPSLYFEIRRNSQAQNPKRWLVR

Sequences:

>Translated_391_residues
MLKTNKSNMTIMMKPVQVISTVLLISSSLCAVLFSASPLAASKGELKGVSSEISRQQKTLTSQQKKLDNLQANLKQQELS
ISLLEKAIKTSKKQLNTANANVASLDNKIKALTAQKKAQTDKLEQLIQTYYMTSRAKASSHILNTGVEEDRISHYYQHLA
KARSATIKTIEQTQLELEESHKQRLLEQEQIATLLNQQVAKRNKLSQTQTQRKKTVGSIKKNISGDKNYLAELQRNETRL
KAEIAKAEKAARERRNAVPMDGLAKRKGKLPWPIKDKVLHNYGSRQTGQVNWKGMVIKAKYGQQVKSVYSGTVVFAEYLR
GYGLVVLLDHGKGDMTLYGFNQALLKKEGDKVKAGEAIALAGDTGGQTRPSLYFEIRRNSQAQNPKRWLVR
>Mature_391_residues
MLKTNKSNMTIMMKPVQVISTVLLISSSLCAVLFSASPLAASKGELKGVSSEISRQQKTLTSQQKKLDNLQANLKQQELS
ISLLEKAIKTSKKQLNTANANVASLDNKIKALTAQKKAQTDKLEQLIQTYYMTSRAKASSHILNTGVEEDRISHYYQHLA
KARSATIKTIEQTQLELEESHKQRLLEQEQIATLLNQQVAKRNKLSQTQTQRKKTVGSIKKNISGDKNYLAELQRNETRL
KAEIAKAEKAARERRNAVPMDGLAKRKGKLPWPIKDKVLHNYGSRQTGQVNWKGMVIKAKYGQQVKSVYSGTVVFAEYLR
GYGLVVLLDHGKGDMTLYGFNQALLKKEGDKVKAGEAIALAGDTGGQTRPSLYFEIRRNSQAQNPKRWLVR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=416, Percent_Identity=34.1346153846154, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=37.5, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=34.453781512605, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081989, Length=145, Percent_Identity=34.4827586206897, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43751; Mature: 43751

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTNKSNMTIMMKPVQVISTVLLISSSLCAVLFSASPLAASKGELKGVSSEISRQQKTL
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
TSQQKKLDNLQANLKQQELSISLLEKAIKTSKKQLNTANANVASLDNKIKALTAQKKAQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DKLEQLIQTYYMTSRAKASSHILNTGVEEDRISHYYQHLAKARSATIKTIEQTQLELEES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKQRLLEQEQIATLLNQQVAKRNKLSQTQTQRKKTVGSIKKNISGDKNYLAELQRNETRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KAEIAKAEKAARERRNAVPMDGLAKRKGKLPWPIKDKVLHNYGSRQTGQVNWKGMVIKAK
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEH
YGQQVKSVYSGTVVFAEYLRGYGLVVLLDHGKGDMTLYGFNQALLKKEGDKVKAGEAIAL
HHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEE
AGDTGGQTRPSLYFEIRRNSQAQNPKRWLVR
ECCCCCCCCCCEEEEEECCCCCCCCHHHCCC
>Mature Secondary Structure
MLKTNKSNMTIMMKPVQVISTVLLISSSLCAVLFSASPLAASKGELKGVSSEISRQQKTL
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
TSQQKKLDNLQANLKQQELSISLLEKAIKTSKKQLNTANANVASLDNKIKALTAQKKAQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DKLEQLIQTYYMTSRAKASSHILNTGVEEDRISHYYQHLAKARSATIKTIEQTQLELEES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKQRLLEQEQIATLLNQQVAKRNKLSQTQTQRKKTVGSIKKNISGDKNYLAELQRNETRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KAEIAKAEKAARERRNAVPMDGLAKRKGKLPWPIKDKVLHNYGSRQTGQVNWKGMVIKAK
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEH
YGQQVKSVYSGTVVFAEYLRGYGLVVLLDHGKGDMTLYGFNQALLKKEGDKVKAGEAIAL
HHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCEEEEECCHHHHHCCCCCEECCCEEEE
AGDTGGQTRPSLYFEIRRNSQAQNPKRWLVR
ECCCCCCCCCCEEEEEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]